Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0315 ATGAAGAAGAAGTGTGAGCTGTGCAAGTGTGCGGCAAAGTTGTTCTGTGAATCAGATCAAGCGAGCCTGTGTTGGGAATGCGATGCAAAGGTTCACAGTGCGAACTTTCTGGTGACAAAGCATCAAAGGGTTCTTCTCTGCCATGTTTGCCAATCACTCACAGCTTGGCGTGGCTCTGGACCCAAGTTTGTTCCCACCATCTCCGTTTGCACCGATTGTGTCACCCGAAACAACGACACTTCTAACCAACAGAATGATGAAGATGATGATCACGATGATGATGGCACTACTAGAGAGTATTATGATGATGATGATGAGCTAGAAAACGATGGTGTAGTTGGTGGTCATCATCATCATCATGAGGATGACGATGATGAAGAAAATCAAGTGGTTCCATGGACATCATCTTCACTTCCCCCTCCAGCTTCCACTTCTTCAAATAGTGCAACCACTTCTACCAGGTTCTCTAATGGTGCTGAAGAAGAAGATCAAGAAGAAGAAGAAGGATTGTCGGACTAA 519 0.4509 MKKKCELCKCAAKLFCESDQASLCWECDAKVHSANFLVTKHQRVLLCHVCQSLTAWRGSGPKFVPTISVCTDCVTRNNDTSNQQNDEDDDHDDDGTTREYYDDDDELENDGVVGGHHHHHEDDDDEENQVVPWTSSSLPPPASTSSNSATTSTRFSNGAEEEDQEEEEGLSD* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0315 172 MobiDBLite consensus disorder prediction 76 172 - -
Dod03g0315 172 MobiDBLite consensus disorder prediction 85 109 - -
Dod03g0315 172 MobiDBLite consensus disorder prediction 130 157 - -
Dod03g0315 172 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 166 - -
Dod03g0315 172 CDD Bbox1_BBX-like 4 46 - -
Dod03g0315 172 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Dod03g0315 172 Pfam B-box zinc finger 3 45 IPR000315 GO:0008270
Dod03g0315 172 MobiDBLite consensus disorder prediction 110 126 - -
Dod03g0315 172 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 166 - -
Dod03g0315 172 SMART bboxneu5 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0315 Dod-Chr3 3809586 3810631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0315 1 142 C2C2-CO-like Transcription Factor Family AT4G27310 38.182 1.49e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod03g0315 zf-B_box 3.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0315 - - gmx:100306080 157.532