Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0308 ATGGAGAGAACACAGGTCACCCTTTCTTTTCTTCTTGCTAGTTGTTGCTACTTCATATCCGTGTTTCCAGCACTTTTGGAAGCAGATGATAGCATAACCCCACCACAAACCATCAGTGGCAACCACACACTAGTCTCTCCTGCCCAAAAATTTGAACTGGGCTTCTTCAGTCCTGGCAACTCCACTCACACATATCTTGGAATATGGTACTACCACATTCCTAACAAAACTGTTATTTGGGTTGCAAATAGAGACAAGCCACTAGCTAATTCTGCTGGCTCCTTAACATTCAGCAATGACGGGAAGCTCCTACTTGTCAGCCACACAGGAAGTGTTGTGTGGTCTTCGAATTCTTCTAGAGCTGCAAGAAATCCAGTGGCACAGCTTCTAGACACTGGAAACTTTGTGTTGAAGGACTTTGAAGATGGAATCACTGAGGAGTATTTGTGGCAGAGTTTTGACTATCCATCTGACACATTGGTGCCACGAATGAGACTTGGTTGGAACTTCAAAACTGGCTTGAACCGACAATTGACTTCTTGGAAGAGCAATGATGATCCTTCTTCAGGAGAATACACTTACTGTGTGGACCCTCGTGGCCTTCCTCAGCTTTTTCTTCACAAGGGGAACAAGAAGGTCTTCAGAAGTGGACCATGGTATGGACAACAGTTTAAAGGTGACCCGGTTCTCAGTGCAAACCCAGTTTTCCAGCCCATATTTGTTTTTGATTCTGATGAAGTGTCTTACTCATATGAGGCTAAAGACAACATGATCTCAAGGTTTGTGCTTAGCCAATCTGGTTTGTTTCAGCATTTCTCATGGAATGATCATCAATCCAGTTGGCTGTCTGAGTTCTCAGTTCAAGGGGACCAATGTGATGATTATGGCCTTTGTGGTGCTTATGGCTCTTGTAACATCAAAAGCTCCCCTATTTGCAAGTGTTTGAAGGGGTTTGAGCCTAGGCAGCCTCAAGATTGGAAAATGTCTCAATGGTCAGGTGGATGTGTTAGGAAGGATTCACAGGTTTGCGGAAATGGAGACACATTTGAGAAGTGCACAGGATTGAAACTTCCAGATGCTGCAGAGTTTCATACAAACTACAGCATTAGCATCAATGACTGTGAGGCAGAATGCTTGAAGAATTGCTCTTGTGTAGCTTATGCTAAACTAGATATAAATGCAAGTGGCAAAGGCTGTATTACTTGGTTCGGGGACTTATTTGATATTAGAGAGGTTCCTGTGTATGGTCAAGATCTATACTTGAGACTTCCAGCTTCAGAACTAGATTCAAATGCTGACAGCAACAAAAGGAAGAAACTCATACTTCTTCCTGTGGCTGTATCGATAAGTTCAACAATTTTTGTCTTAGCATTATGGTTCATAATTAGGAAATGGCGAAGAAGTGAAGTGGCCGGAGAGACAGATATTCAATTTAGTGATGGCAGGGCAACACGTGAGAGGAATGAATTTGAACTCCCATTATTTGAGATTGCCACCGTTGAAGCCGCCACTAGGAGTTTCTCTGTTTACAATAAGATTGGAGAAGGTGGATTTGGTCGTGTATACAAAGGTGAACTTCCATCAGGACAAGAAATAGCAGTGAAAAGGCTCTTAGAGAGTTCAGGACAAGGCCTGCAGGAGTTCAAGAATGAGGTCACTTTGATCTCCCAACTTCAGCATCGAAACCTTGTTAAGCTTTTGGGTTGCTGCATTCATGGAGAAGATAAAATGTTGATCTACGAATACATGCCGAACAGAAGCTTGGACTCATTATTATTTGATGAAACCAAGCGTTCTGTCCTCAATTGGCAAAAGAGGCTAGACATTATTATTGGCATTGCTAGGGGACTTCTCTACCTTCATAGAGATTCAAGGCTAAGAATAGTCCATAGAGACCTGAAAGCAAGCAATGTCCTTTTGGACATGGAAATGAACCCAAAGATTTCTGACTTTGGAATGGCTAGAATGTTTGGTGGTGATCAAACTGAAGCAAAGACAAAGAGAGTAGTTGGAACCTATGGATACATGTCACCAGAGTATGCAATCGATGGACACTTCTCTTTCAAATCGGATGTCTTTAGCTTTGGGGTCTTACTGTTAGAACTATTGAGCGGCAAGAAAAACAAAGGATTTCTTCACCCAGATCACAAACTCAATCTCCTAGGCCATGCATGGAAGCTTTGGAATGAAGGTAAGGCCTTGGAGCTGATAGATCCTTTGCTTGAGAATGAGTTTCCTGCCTCGGAAGCTCAAAGGTGCATACAAGTGGGGCTTTCATGCGTCCAGCAGCACCCAGAAGACAGGCCAACAATGTCATCAGTGCTGGTGATGTTGGACAGTGACAGTGACAGTGCAGTGCTGCCTCAACCTGGAAGACCAGGACTATATTCAGAGAGATGTTTCTCGGAGACAGATTCATCATCACGTGGCAGACTCAACTCCAGTTCCAATGACATAACCGTCACTTTGATAGAGGGTCGTTAG 2484 0.4332 MERTQVTLSFLLASCCYFISVFPALLEADDSITPPQTISGNHTLVSPAQKFELGFFSPGNSTHTYLGIWYYHIPNKTVIWVANRDKPLANSAGSLTFSNDGKLLLVSHTGSVVWSSNSSRAARNPVAQLLDTGNFVLKDFEDGITEEYLWQSFDYPSDTLVPRMRLGWNFKTGLNRQLTSWKSNDDPSSGEYTYCVDPRGLPQLFLHKGNKKVFRSGPWYGQQFKGDPVLSANPVFQPIFVFDSDEVSYSYEAKDNMISRFVLSQSGLFQHFSWNDHQSSWLSEFSVQGDQCDDYGLCGAYGSCNIKSSPICKCLKGFEPRQPQDWKMSQWSGGCVRKDSQVCGNGDTFEKCTGLKLPDAAEFHTNYSISINDCEAECLKNCSCVAYAKLDINASGKGCITWFGDLFDIREVPVYGQDLYLRLPASELDSNADSNKRKKLILLPVAVSISSTIFVLALWFIIRKWRRSEVAGETDIQFSDGRATRERNEFELPLFEIATVEAATRSFSVYNKIGEGGFGRVYKGELPSGQEIAVKRLLESSGQGLQEFKNEVTLISQLQHRNLVKLLGCCIHGEDKMLIYEYMPNRSLDSLLFDETKRSVLNWQKRLDIIIGIARGLLYLHRDSRLRIVHRDLKASNVLLDMEMNPKISDFGMARMFGGDQTEAKTKRVVGTYGYMSPEYAIDGHFSFKSDVFSFGVLLLELLSGKKNKGFLHPDHKLNLLGHAWKLWNEGKALELIDPLLENEFPASEAQRCIQVGLSCVQQHPEDRPTMSSVLVMLDSDSDSAVLPQPGRPGLYSERCFSETDSSSRGRLNSSSNDITVTLIEGR* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0308 827 Pfam Domain of unknown function (DUF3403) 782 827 IPR021820 GO:0004674
Dod03g0308 827 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 825 - -
Dod03g0308 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Dod03g0308 827 CDD STKc_IRAK 513 779 - -
Dod03g0308 827 CDD B_lectin 36 156 IPR001480 -
Dod03g0308 827 SMART serkin_6 507 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0308 827 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Dod03g0308 827 CDD PAN_AP_plant 344 424 - -
Dod03g0308 827 SUPERFAMILY Protein kinase-like (PK-like) 491 790 IPR011009 -
Dod03g0308 827 SMART blect_4 35 156 IPR001480 -
Dod03g0308 827 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Dod03g0308 827 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 825 - -
Dod03g0308 827 Pfam Protein tyrosine and serine/threonine kinase 509 776 IPR001245 GO:0004672|GO:0006468
Dod03g0308 827 Pfam PAN-like domain 343 409 IPR003609 -
Dod03g0308 827 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Dod03g0308 827 Pfam S-locus glycoprotein domain 214 321 IPR000858 GO:0048544
Dod03g0308 827 Pfam D-mannose binding lectin 77 182 IPR001480 -
Dod03g0308 827 Gene3D - 25 153 IPR036426 -
Dod03g0308 827 Gene3D Transferase(Phosphotransferase) domain 1 583 787 - -
Dod03g0308 827 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Dod03g0308 827 PIRSF SRK 1 827 IPR024171 GO:0004674
Dod03g0308 827 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Dod03g0308 827 SMART ntp_6 344 423 IPR003609 -
Dod03g0308 827 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Dod03g0308 827 ProSiteProfiles Protein kinase domain profile. 507 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0308 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 187 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0308 Dod-Chr3 3580704 3584632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0308 423 795 Receptor kinase-like Gene Family AT4G05200 51.459 8.72e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g0308 PK_Tyr_Ser-Thr 5.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0308 - - gmx:100804024 1389.02