Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0305 ATGGCTGAGGAGTTTCAAGCTGCAATTTGTGGTGATAACTGGTGGAACATTAATAATTCAACAAGAAGTATGTTCCCTCTGATGATGGGATCAACATGTTCAGTGGCAGCTAATAATGATGCAGGGAACTATAGCACATGGCAAACTGATTTCATGGATTTGAAGGCAACAACAACCCCAAGGTCTTGTGCTGAGGAGACTAATAATAATAACAACTTTGTTTCTAATGGCTCCCTGCCTTTTCCAGATGCTCAGAAACAACAGCAGTGTGAATCAGCAGCAGCAAGTGGAAGTACTGGGAGCATCTTGATCGATTCCACCTTACAAATGATGGGTTTTGGCCTGTCGTCTTCAACTTCATCGAATTGGAATCAGTCTCTATTTAGTTGTGATGAAAGGCCAGAGAACAATTTTCATTCTGTGCTACAAGAAGAAACAGGCATAGATTCTTCAAACAACTCACAGATCCAAAAGGATTGGAGCCCAAAGAATTACTCATCGTCTGGTGGACAAGTTTCCAGCGTTGATGCTGCTTTCAAGCCAATGAACCAAGAATTATTTCCCTTAGATCAGCAGAGTCTGAGTTCTGTGACCAGCACTACTGGTGGATTCCCAATTGGATCAGCCTCCTATGGTTACGCTTCAACGTTGATGCAAGCTGGCTTGTATGATCCTGATCCTCAACCACAACCACAACCACAGAACTCACTTTTCACCAACCCTTCTTCTATGTCCTATTCATGTGCTACAAACTATGGGACATCCTCCACTGAACTGTCACCCACATGGTCTTCCCTTCTGAAGCAGCCATCATCATCATCATCATCAATGCCTCCAAAGCAGCAGCTTAGTGGATTGCACTTCTCCAACAATACTCCTTTCTGGAATGCTTCAGCCGAGGCACTTCATGACATAAGATCAGCAGGTGTCTTTTCTTCTTCATCACAAGCACAATATCAAACACCAACTTTTGATGACAAAACGAATTGCCCAAGTGCTCCACTAAACAAGCTGAAGAGAGAAGGATCTCCAGACAAGGCATCATCAGCGGGGAACAAAAGTGCTTCTGAACCTGCGTTCAAGAGGCCAAGAATTGAAACTCCATCCCCGTTGCCTACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGGATCACTGCTCTTCAGCAATTGGTATCACCTTTCGGAAAGACGGACACAGCATCCGTTCTCCACGAAGCCATCGAGTACATCAAGTTCCTTCATGATCAAGTCAATGTTTTGAGCACTCCATATAAGAAAAATGGAGCTCCCATTCAGCACCAGCAGGGTTGTGATAATCCGAAGGACTCAGAAGGACCAAAACAAGATTTGAGAAGCCGAGGATTGTGTTTGGTACCGATTTCAAGCACATTCCCAATGGCCACTGAGACCACTGCTGATTTCTGGACGCCTACATTCGGAGGGGCACTCATCAGCAGGTAG 1464 0.4481 MAEEFQAAICGDNWWNINNSTRSMFPLMMGSTCSVAANNDAGNYSTWQTDFMDLKATTTPRSCAEETNNNNNFVSNGSLPFPDAQKQQQCESAAASGSTGSILIDSTLQMMGFGLSSSTSSNWNQSLFSCDERPENNFHSVLQEETGIDSSNNSQIQKDWSPKNYSSSGGQVSSVDAAFKPMNQELFPLDQQSLSSVTSTTGGFPIGSASYGYASTLMQAGLYDPDPQPQPQPQNSLFTNPSSMSYSCATNYGTSSTELSPTWSSLLKQPSSSSSSMPPKQQLSGLHFSNNTPFWNASAEALHDIRSAGVFSSSSQAQYQTPTFDDKTNCPSAPLNKLKREGSPDKASSAGNKSASEPAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYKKNGAPIQHQQGCDNPKDSEGPKQDLRSRGLCLVPISSTFPMATETTADFWTPTFGGALISR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0305 487 MobiDBLite consensus disorder prediction 430 451 - -
Dod03g0305 487 Gene3D - 375 435 IPR036638 GO:0046983
Dod03g0305 487 MobiDBLite consensus disorder prediction 259 285 - -
Dod03g0305 487 MobiDBLite consensus disorder prediction 319 372 - -
Dod03g0305 487 PANTHER TRANSCRIPTION FACTOR BHLH123 45 475 - -
Dod03g0305 487 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 375 431 IPR036638 GO:0046983
Dod03g0305 487 MobiDBLite consensus disorder prediction 148 167 - -
Dod03g0305 487 CDD bHLH_AtbHLH_like 371 422 IPR045239 -
Dod03g0305 487 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 475 - -
Dod03g0305 487 MobiDBLite consensus disorder prediction 221 240 - -
Dod03g0305 487 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 365 414 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0305 Dod-Chr3 3535919 3538788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0305 269 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 52.941 4.69e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0305 - - gmx:100794682 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1573 04 37741034 37744545 Dod03g0305 03 3535919 3538788 PCT