Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0284 ATGGGTTCCCTGGAAAACCCGAGTTGGGTGTTGGATTATGGTTACCTAGATGACATTACCGTCCCCTGTTTTGACTCTGTTTCTGACCCTCCCAATTTCGCTTGGTCCTCCCCTGTTCCTGCTCCTCCTACCCTCAGTGTGGAGCCAGATGACTCTTATGGAAATTCTGATGGTTTCAAGGAATCTGGTTCAAGAAAGCGCTTGAGGTCGGCAGGATCCAGCAACCCATCTGGTTCAAAAGCATGTAGAGAGAAAATGCGAAGGGATCGACTGAATGACAGATTTTTGGAACTTGGTACCATCTTGGACCCTGGAAGGCCTCCCAAAATGGACAAGGCTGTCATATTAAGCGATGCAGTTCGAACGGTGTTACAGTTGCAAGAAGAGGCTCAGAAACTTAGAGAGTCTACTGAGAATCTGCAGGAGAAAATCAATGAATTGAAGGCTGAGAAAAATGAGCTTCGTGATGAGAAGCAGCGACTGAAAGCTGAGAAAGATAACCTTGAGCAGCAGCTCAAAGCCTTCACTTCCCAACCTGGCTTCATGCACCATCCCCCTACCCTCCCAGCTGCTTTCCCTGCTGCACCAGGACAAGTTGCTGGCAGCAAGGTGGTGCCTTTCATGGGCTACCCTGGAGTTTCCATGTGGCAGTTTTTACCACCTGCTGCTGTGGATACCTCACAGGACCATGTACTTCGCCCCCCAGTGGCATAA 714 0.4958 MGSLENPSWVLDYGYLDDITVPCFDSVSDPPNFAWSSPVPAPPTLSVEPDDSYGNSDGFKESGSRKRLRSAGSSNPSGSKACREKMRRDRLNDRFLELGTILDPGRPPKMDKAVILSDAVRTVLQLQEEAQKLRESTENLQEKINELKAEKNELRDEKQRLKAEKDNLEQQLKAFTSQPGFMHHPPTLPAAFPAAPGQVAGSKVVPFMGYPGVSMWQFLPPAAVDTSQDHVLRPPVA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0284 237 PANTHER BHLH TRANSCRIPTION FACTOR 3 237 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Dod03g0284 237 CDD bHLH_AtILR3_like 80 155 - -
Dod03g0284 237 SMART finulus 81 132 IPR011598 GO:0046983
Dod03g0284 237 Coils Coil 116 178 - -
Dod03g0284 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Dod03g0284 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 151 IPR036638 GO:0046983
Dod03g0284 237 Pfam Ezrin/radixin/moesin, alpha-helical domain 116 177 IPR046810 -
Dod03g0284 237 Gene3D - 79 155 IPR036638 GO:0046983
Dod03g0284 237 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 3 237 - -
Dod03g0284 237 MobiDBLite consensus disorder prediction 32 88 - -
Dod03g0284 237 Pfam Helix-loop-helix DNA-binding domain 79 127 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0284 Dod-Chr3 3067225 3072756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0284 1 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 58.750 6.22e-88 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod03g0284 HLH 5.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0284 - - nnu:104604927 316.235