Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0281 ATGTCCACCATAAGACAGTTGAATGTTCTAAACCAGATCTTCTTGTGGCCAATGGTCTGTCTCTTTGTGGCCGGTTATGGTGCTGAAAGTGACATCAATTGCTTACGAGACATCAAGAACTCATTACTTGACCCATCTGATCACTTATATAGCTGGGATTTCAATAGCAACACTAAAGGTTACTCATGCAAATTTGCTGGTGTTGAATGCTCGAGTGATAAGGAAGATAGAGTAATCAGTCTCAAGCTTTCTAAGATGGGGCTGGAGGGCCAGTTTCCTCATTGTATTGAAAATTTCTCATGGTTGCAGAATCTTGACCTTTCATATAACCAGCTTTATGGATATATCCCACCTGATATTTCAAGTAAGTTACCATATCTGACCTCACTTGATCTCTCAAATAACAAGTTCTATGGTGAAATTCCAAGGGGTATTGCTGACTTGTCCCACTTGAATACCCTTAGACTTGATGGCAACCAGCTAAGTGGCCAAATCCCACAAGAACTTGGGTTGCTTCCCAGGATTAGAGTGTTTAGTGTTGCTAACAATTTGTTATCAGGGCCAGTGCCTGTCTTTGCCAATTATGTTGATGTTAGTTGGAGCTATGTTAACAATAGTGGACTCTGTGGGGGATCACTAGGAAGCTGTGGAGAGAGCTTGTGTGGCAGATCATTTTGGATTAGTTTTGTTATTGCTTTTGTTTCTTCAGCAACTTCTGTCATAGTAACATTCATGGACTACAGTGCACCTTGGAAAGAATTCAAACGGAGAAGGAGGAGTAACGCCATACATTCCTTAAGAAAGAGGCAGAATAATCACAGGGACACTGTAAAAGTAGCTGAATTGGTGCCACTGGCCTTGCAAGCGGAAGGAAGCAAAGAGCTCTCAAGATTGTTGGAGAGATTGATACCTAGAATGAGCTTCATGGGACTATGCAAGGCAACGAATTACTTTAGCACAGACAACATCATGGGGTTGGGAGCAACCGGGATTATGTACAAGGCAGAGGAACCAAATAACTGTTTCCTGGCAGTGAAGAGACTATATCATTCTGATAAGTACAAGAGAGAGTTCTTGCTTGAAACAATGATTCCAGGGAGACACAGGCACCGAAACATAGCCCCTATGCTTGGATTCTGCATAGAAAAAAATGAGAGGATCCTGGTGTATAAGTACATTTCAAATGGAAGACTCTCTGATTGGTTACATTCTCAAGAAGGACGTCAACCTATAACATTGGAATGGCCTGAGAGGATTCACATTGCACTAGGGCTAGCAAGAGGCTTGTCTTGGCTTCATAAAAGTGACAAGGTCGAATTGGACATCCCTTTCTCGAAAAACGAGCAATGA 1350 0.4207 MSTIRQLNVLNQIFLWPMVCLFVAGYGAESDINCLRDIKNSLLDPSDHLYSWDFNSNTKGYSCKFAGVECSSDKEDRVISLKLSKMGLEGQFPHCIENFSWLQNLDLSYNQLYGYIPPDISSKLPYLTSLDLSNNKFYGEIPRGIADLSHLNTLRLDGNQLSGQIPQELGLLPRIRVFSVANNLLSGPVPVFANYVDVSWSYVNNSGLCGGSLGSCGESLCGRSFWISFVIAFVSSATSVIVTFMDYSAPWKEFKRRRRSNAIHSLRKRQNNHRDTVKVAELVPLALQAEGSKELSRLLERLIPRMSFMGLCKATNYFSTDNIMGLGATGIMYKAEEPNNCFLAVKRLYHSDKYKREFLLETMIPGRHRHRNIAPMLGFCIEKNERILVYKYISNGRLSDWLHSQEGRQPITLEWPERIHIALGLARGLSWLHKSDKVELDIPFSKNEQ* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0281 449 PANTHER RECEPTOR-LIKE PROTEIN 55 9 437 - -
Dod03g0281 449 PRINTS Leucine-rich repeat signature 102 115 - -
Dod03g0281 449 PRINTS Leucine-rich repeat signature 124 137 - -
Dod03g0281 449 Pfam Protein tyrosine and serine/threonine kinase 323 438 IPR001245 GO:0004672|GO:0006468
Dod03g0281 449 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Dod03g0281 449 SUPERFAMILY Protein kinase-like (PK-like) 299 433 IPR011009 -
Dod03g0281 449 ProSiteProfiles Protein kinase domain profile. 318 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0281 449 Gene3D Transferase(Phosphotransferase) domain 1 393 442 - -
Dod03g0281 449 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 9 437 - -
Dod03g0281 449 Gene3D Phosphorylase Kinase; domain 1 281 392 - -
Dod03g0281 449 Gene3D Ribonuclease Inhibitor 28 216 IPR032675 -
Dod03g0281 449 SUPERFAMILY L domain-like 29 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0281 Dod-Chr3 3041001 3046190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0281 29 433 Receptor kinase-like Gene Family AT3G28450 40.291 1.00e-84 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Dod03g0281 PK_Tyr_Ser-Thr 8.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0281 - - gmx:106795644 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1597 04 38061250 38065147 Dod03g0281 03 3041001 3046190 PCT