Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0255 ATGGAGAACTATTCATACCCATCATACCCAGATTCGGGGGACTCATCCCCTCGCTCCAGGGAGATCGAGTTCGAGAACCCGCCACCATGGGACGACCCTCAGCAACCGCCGCCGAACTATAAGGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCCCGCTCCCACGACAACCAGCTCTCCTACGTCGGCGGCGAGACCAAGATCCTCGCCGTCGACCTCAACGTCAAGTTCCCCGCCATGCTTTCCAAGCTCTCTGCCCTCTGCGGTGCCTCCGACCCAAACGACGTGTCGTTCAAGTACCAGCTCCCCGGCGAGGACCTCGACGCCCTCATCTCCGTCTCCAACGACGACGACCTCGACCACATGATGCACGAGTACGATCGCCTCTTCCGCGCTTCCGCTAGACCCGCCCGCATGCGACTCTTCCTCTTCCAAACCTCCGCCAACGCAAGCAGCACCACCAACGCGAACATCACCAACAGTAACAATAACAGTAACAATCTTTCAACTGAAAGCTTCGTTGACCCGACGCGACCCGAACCGGTTAAACCGAACTCCAACGTCGATTTTCTCTTCGGTCTCGAGAAGAGTGCTGCCCCTGTCGTTCCTCCGCAGCAGCAGCCTGTGGCGGTGAAGTTCCATGATCCGGCGCCTGAGCCTGTTGCGCCGCCTCAGCCGTTGCCGGAGTACCAGCAGCGTGTCGTTGCGAATCCCTCCGATCGGGTTATTGGATCCGATCCGAACTTGAACCACCCGCTCGAGGTTCAGAGGCAGTTGCAGCGGTTGCAAATCGCGGAGGCCGAACAAGCAGCTTATCGGAGGAAAAGCGAGGAAGGCCTCGTTGGGAATTACGCCGCAGCCGGCGGCGGCGGCGATTACTACCCTCAGAAGCTCCCGCCGGCGTCGAATTTCCCGGCAAGCGCGGCGCACCATGCGGGATATTGGCCGGAGAAACATGTCTCCGGCGAGGTTTATCAGCCGGCGGTGTCGTCAGCTGCCGGAGGAGGTGAATCGCCGGTTTACGTGATTCCGCATGCTGGCGCGTTCTATCACGCGCCGATGGTGCGTCCGTCGGCTCCGCCGCCGGCGACTCAGGGATACTACGCGGTGCACCGAATGGCTTCCGATGGTTACCGCGACGCGCAGGTGTACGGCGGCATGCCCCAGAATAAGGCGCCGTTTTCGTCGGCGGCTCCCACAAGCTTGCCACCGGCGCAGCCGGTTAAAGGTCCCACGTATACGGAAGGGTTTGGCGTGGTTAGGCCCGTTGGGGCACCGGATAATACTGGGGCTGCGTACGCACAGGTGGCGTATGATAGTGGAAGTGGAAGACAGGTTTACTATACTGCGCCGGGTGGTGGTGTGGTGCACGCGCCGACGTACCAAGGGGTTGCTCAGACTGTCCCTGGTGATATAAGACCCGGTGGGGTGTCGTTGGGTCAAGATGGTAAAGTCATAAGCAAGGTTTCTCAAGGTTCAGTGTGA 1491 0.6016 MENYSYPSYPDSGDSSPRSREIEFENPPPWDDPQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDLNVKFPAMLSKLSALCGASDPNDVSFKYQLPGEDLDALISVSNDDDLDHMMHEYDRLFRASARPARMRLFLFQTSANASSTTNANITNSNNNSNNLSTESFVDPTRPEPVKPNSNVDFLFGLEKSAAPVVPPQQQPVAVKFHDPAPEPVAPPQPLPEYQQRVVANPSDRVIGSDPNLNHPLEVQRQLQRLQIAEAEQAAYRRKSEEGLVGNYAAAGGGGDYYPQKLPPASNFPASAAHHAGYWPEKHVSGEVYQPAVSSAAGGGESPVYVIPHAGAFYHAPMVRPSAPPPATQGYYAVHRMASDGYRDAQVYGGMPQNKAPFSSAAPTSLPPAQPVKGPTYTEGFGVVRPVGAPDNTGAAYAQVAYDSGSGRQVYYTAPGGGVVHAPTYQGVAQTVPGDIRPGGVSLGQDGKVISKVSQGSV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0255 496 Pfam PB1 domain 57 147 IPR000270 GO:0005515
Dod03g0255 496 CDD PB1_UP2 45 146 - -
Dod03g0255 496 MobiDBLite consensus disorder prediction 1 15 - -
Dod03g0255 496 SMART PB1_new 56 148 IPR000270 GO:0005515
Dod03g0255 496 Coils Coil 257 277 - -
Dod03g0255 496 MobiDBLite consensus disorder prediction 155 182 - -
Dod03g0255 496 MobiDBLite consensus disorder prediction 155 176 - -
Dod03g0255 496 Gene3D - 62 148 - -
Dod03g0255 496 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 490 - -
Dod03g0255 496 MobiDBLite consensus disorder prediction 1 39 - -
Dod03g0255 496 SUPERFAMILY CAD & PB1 domains 57 153 - -
Dod03g0255 496 PANTHER OS05G0427100 PROTEIN-RELATED 1 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0255 Dod-Chr3 2709775 2711957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0255 41 151 MAP Kinase Kinase Kinase AT3G46920 47.321 7.53e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0255 - - adu:107480527 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0255 03 2709775 2711957 Dod03g0255 03 2709775 2711957 ECH
Dod04g1619 04 38270074 38271824 Dod03g0255 03 2709775 2711957 PCT