Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0245 ATGCGACTCTGGGAGAAGAACCCTTCGAAGCTTGCTGACTTCAAAACCGAATTCTCCTTTGTTGTTTATGCAGATCACAAGAGTAAGTATGGAGATGGGTTGGCATTCTTCTTGGCATACCCAAATCCACCACATCTAGAGGATATTGAAGAAGGAGGTGACCTTGGCCTTGTGGATGGTAACCAAGTATTGAATTCAACACAACACTCATTTGTGGCAGTGGAGTCTGATACCTTTCAAAATCCATGGGATCCAAGTGGCCTTCATGTAGGTATGAATTTCAACTCTATGAGGTCTAAAATAACTAAGCTAGTGTTCATGGATATTTGGAGCAGAAAAATCTATAATTGCAGCATTGAGTACAGTTCCAGCACCCTCAATTTAAGCGTTTTATTTTCTGGTTACAAACATGATAGAATAGCTAAAACATACATTTCATACAAAGTTGATTTGAGAGATTACTTACCAGAGTCAATTATACTTGGATTCTCAGCAGCTACAGGAAATTTTTATGAGGTTCATAGTCTGCATTCATGGTCATTTAGTTCAAGTTTAGAAAGTGATGAGAGTGTCACAAGTCCGATAGAACCCACCAGCAATCCTAAGTCTGAAAAAGGAAGCAAGATAGGAATGTTGGCGGGGCTAGGAATTGGTATAGGGGTGATTGTGAGTTTGTCAGGGATAGTTTATACTTTATTGTGGAAAAGGACTAGTAGGCAAAAGGAAGAGTTGTCTTTTGATCTCAACATAGATGATGAATTCCAAAAGGGCACTGGACCTAAGAGGTTCTGCTACAATGAACTGGTAAGTGCAACAAATAAATTTTCAGAGTCAGAGAGGCTTGGACAAGGTGGTTTTGGTGGTGTTTATAAAGGTTACATGAAAGACTTAAACTCCTATGTTGCCATAAAAAGGGTATCAAGAGGGTCTAGTCAAGGTATAAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAATTGAGACGTAGAAATTTGGTACAACTTGTTGGTTGGTGCCACAGGAAGAATGATCTCCTCCTCATATATGAGTTCATGCCAAATGGTAGCTTAGACTCTCATCTATTCAGTGGAAACAGCTTATTGACATGGCCAATAAGGTATAACATAGCTTTGGGCTTGGCTTCAGCATTGCTTTACCTGCAAGATGAATGGGAACAATGCTCGTGGATCATGAGAAAGGGTCCACAAACCACACTTGTAGCTGGGACCAGGGGCTATATTGCTCCAGAATATTTCACTTCAGGAAAGGCTTACAAGGAATCTGACATATACAGTTTTGGGGTTGTGTTATTGGAGATTGCCAGTGGAAGAAAATCCATTGACTTGAAAGCCATGGAGGATCAAGCAAGCTTAGTTGAGTGGCTTTGGAAGCTCTATGGATTAGGGAAGTTTCTTGAAGCAGCTGACTCGAAACTAAATGGATCATTTGGTGAGCAACAAATGGAACGTTTAGTTGTTGTTGGCCTTTGGTGTGCTCATCCAGATTATTCATTCAGGCCTTGTGTGAGGCAAGTGATTCAAGTGCTCAAATTTGAAGCACCTTTACCAATTCTTCCTGACAGAATGCCAGTGCCAACATATCTTCCTCCAACATTAAAAGAAATTTTTGCTTCATTTTCATCTCCATTTTGGGGGTCAGAAGCTAGCAATAGGCAAGATCGTAATGTGTACCATCTCTCCTGTTTGAGGATCAAGTCTCTTGTGACTCCTACTAAACTACTACAATTCAAGTCCTCAACGTGCGTTTTAAGATAA 1776 0.4032 MRLWEKNPSKLADFKTEFSFVVYADHKSKYGDGLAFFLAYPNPPHLEDIEEGGDLGLVDGNQVLNSTQHSFVAVESDTFQNPWDPSGLHVGMNFNSMRSKITKLVFMDIWSRKIYNCSIEYSSSTLNLSVLFSGYKHDRIAKTYISYKVDLRDYLPESIILGFSAATGNFYEVHSLHSWSFSSSLESDESVTSPIEPTSNPKSEKGSKIGMLAGLGIGIGVIVSLSGIVYTLLWKRTSRQKEELSFDLNIDDEFQKGTGPKRFCYNELVSATNKFSESERLGQGGFGGVYKGYMKDLNSYVAIKRVSRGSSQGIKEYATEVKIISQLRRRNLVQLVGWCHRKNDLLLIYEFMPNGSLDSHLFSGNSLLTWPIRYNIALGLASALLYLQDEWEQCSWIMRKGPQTTLVAGTRGYIAPEYFTSGKAYKESDIYSFGVVLLEIASGRKSIDLKAMEDQASLVEWLWKLYGLGKFLEAADSKLNGSFGEQQMERLVVVGLWCAHPDYSFRPCVRQVIQVLKFEAPLPILPDRMPVPTYLPPTLKEIFASFSSPFWGSEASNRQDRNVYHLSCLRIKSLVTPTKLLQFKSSTCVLR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0245 591 Pfam Protein tyrosine and serine/threonine kinase 278 389 IPR001245 GO:0004672|GO:0006468
Dod03g0245 591 Pfam Protein tyrosine and serine/threonine kinase 413 447 IPR001245 GO:0004672|GO:0006468
Dod03g0245 591 Gene3D - 1 196 - -
Dod03g0245 591 Gene3D Transferase(Phosphotransferase) domain 1 393 535 - -
Dod03g0245 591 PANTHER - 1 395 - -
Dod03g0245 591 CDD lectin_legume_LecRK_Arcelin_ConA 1 172 IPR001220 GO:0030246
Dod03g0245 591 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 401 553 - -
Dod03g0245 591 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524
Dod03g0245 591 ProSiteProfiles Protein kinase domain profile. 275 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0245 591 PANTHER - 401 553 - -
Dod03g0245 591 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 188 IPR013320 -
Dod03g0245 591 Pfam Legume lectin domain 1 190 IPR001220 GO:0030246
Dod03g0245 591 SUPERFAMILY Protein kinase-like (PK-like) 259 539 IPR011009 -
Dod03g0245 591 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 1 395 - -
Dod03g0245 591 Gene3D Phosphorylase Kinase; domain 1 260 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0245 Dod-Chr3 2494576 2496607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0245 3 534 Receptor kinase-like Gene Family AT5G10530 44.133 9.09e-147 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod03g0245 Lectin_legB 3.2e-49 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0245 - - gmx:100780181 731.095