Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0224 ATGGAAGGGGGGAACAGGGAGGAAGCGGAGCGGTGGCTATACACGGCGAACAAGCTGCTCAGCGCACGTGACCTGCACGGGGCCCGCTCCTTCGCCATCCGGGCCCGCGAGTGCGACCCACGCTTCGACGCAACGGAGCTTCTGCTGGCGGTCATCGACACCCTAATGGCCGGTGATGCCCGGATCAGTGACCACCTAGACTGGTACGCCATCCTCCAGGTGCTACGCTACACCCAGAACATTGACTACATCGCCGCACAGTATCGCCGCCTCGCCGTCCTCCTCGACCCCCACCGCAACCCCTTTGCCTTCTCCGCCCACGCCTTCACCCTCGTCCACGACGCATGGTCCGTCCTCTCCAACCCCACCAAGAAAGCTATCTTCGATAACGACCTCAGGCTCCTCACCGAGCCACCTCCTCCTCCTCCGCCGCCGCCGCAGCTCACTGTGGCGCCGCCTGCTCCCGCTCCTATTCTCCCTCAAGCCTTCCCGATTTTGCATAACCATAACCACCAGAGTCACCACCACCAGAACAGTCAGAGTCAGCACCAGCACCATCAGAATCACCACCACCAGCACCAGCAGGTGCAGGAGCAGGAAATGTTCTCGGTGATGAGAAACCCTAGGTCGAAGGAAGCTACGGTGGTGGTTGAGGTGGAGGAGAGGCCGAGTCAGGACAATGTGATGACCGAGTCGACTCGGCCGGCTCGGGCGAGTGAGCCGAGTGAAACGGAAGTTGCGGGGAGCTTCTGGACGGCGTGTCCTTACTGCTTATGTCATAGTTGTCAGAGGGGGTTTCATGCGGTGGCGATAAGGTCGCCGCCGGGTTTGACCGGCAAAGATGGTTCCTTTTGCAGTTGGGGTTTTATCCCACTAGGGTTTTCTGGTGACTTCAAGGATATTAGTGGGTCTTCTTCTAACTGGAACCCTTTCTCTCCTTTGTTTCCTTGCCCTCTCAAAGGGGCTTCTAATAGGAGGTATCAGAAGGGTCCTTGGGTTTACTATGATGATGAGGCGGCGGCAGCGTTTGTGGAGCTTTCTGATACGACGGAGGATGATTCCGATGATGAGGATTGGCGGCGAGGGAATAAGAACGGGAGGAAGAGGACTAGGAAGAATAGGAAGAGTTATGCTAGTGCTGGTGGTGGTGGTGATGTCAGGAGGGCAACGGTGGAGAGGCCTAGGAGAGGGGTTCATAATAATGGTGCAGGGAATGCTGGTGTGGAGAATGGTGAGGCTGTTGATGCTGGTGGCTCTGCAGCGGCGCCGGTTGTGGTGAGGCTGGAAGCTAGCAAGAAAGCTGCATTGGTTGGTTCAAGGCGGAGGGGTGCGGGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTGCCCATGGAGCGGGTGAGAGGAATGGGAATCCGAGTGGGGCAGGGAATACTGAGGATAACATTGAAGGGATTGGGTTTTTTGAAGGGCTTGATGAGTTCCTCAGTAGCTTGCCTATTCTCAATGTTGTTGCTGATGATAAGGTTAAGGGTCATTAG 1545 0.5663 MEGGNREEAERWLYTANKLLSARDLHGARSFAIRARECDPRFDATELLLAVIDTLMAGDARISDHLDWYAILQVLRYTQNIDYIAAQYRRLAVLLDPHRNPFAFSAHAFTLVHDAWSVLSNPTKKAIFDNDLRLLTEPPPPPPPPPQLTVAPPAPAPILPQAFPILHNHNHQSHHHQNSQSQHQHHQNHHHQHQQVQEQEMFSVMRNPRSKEATVVVEVEERPSQDNVMTESTRPARASEPSETEVAGSFWTACPYCLCHSCQRGFHAVAIRSPPGLTGKDGSFCSWGFIPLGFSGDFKDISGSSSNWNPFSPLFPCPLKGASNRRYQKGPWVYYDDEAAAAFVELSDTTEDDSDDEDWRRGNKNGRKRTRKNRKSYASAGGGGDVRRATVERPRRGVHNNGAGNAGVENGEAVDAGGSAAAPVVVRLEASKKAALVGSRRRGAGNLGKLDLNVEFSNEVEEPAHGAGERNGNPSGAGNTEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0224 514 SUPERFAMILY Chaperone J-domain 60 132 IPR036869 -
Dod03g0224 514 Pfam DnaJ domain 67 129 IPR001623 -
Dod03g0224 514 MobiDBLite consensus disorder prediction 350 411 - -
Dod03g0224 514 MobiDBLite consensus disorder prediction 170 190 - -
Dod03g0224 514 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 155 - -
Dod03g0224 514 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 191 514 - -
Dod03g0224 514 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Dod03g0224 514 Gene3D DnaJ domain 60 131 IPR036869 -
Dod03g0224 514 MobiDBLite consensus disorder prediction 135 154 - -
Dod03g0224 514 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 155 - -
Dod03g0224 514 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 191 514 - -
Dod03g0224 514 SMART dnaj_3 66 124 IPR001623 -
Dod03g0224 514 CDD DnaJ 67 121 IPR001623 -
Dod03g0224 514 MobiDBLite consensus disorder prediction 461 483 - -
Dod03g0224 514 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Dod03g0224 514 MobiDBLite consensus disorder prediction 217 241 - -
Dod03g0224 514 MobiDBLite consensus disorder prediction 170 199 - -
Dod03g0224 514 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0224 Dod-Chr3 2214873 2218871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0224 8 513 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 36.466 9.92e-89 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0224 - - gmx:100818960 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1651 04 38851682 38853151 Dod03g0224 03 2214873 2218871 PCT