Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0184 ATGGAGATCGTGAACAAGAACGGCGTGGCGATCGATCTGGCGGCGCTGGCTGAAAAAGAGGACCCGTTTGCGGAGGAGCTGAGGAGGAGGACGGAGGGGCTGAAGGGCGAGGAGGAGCTGTTAGGGTTTCTGAGGGATTTGGAAGGACAGTGGGGGAGCAGGAGGAGGAAGAGGAGGATCGTTGATGCTGCTGATTTCGGTGACGTGCTGCCGCTCGGTTGGAAGCTTCTTCTCGGTTTGAAGAGGAAGGATGGCCATGCACGGATCTATTGCCGCAGATACATGAGCCCTAGTGGACAGCAGTTTGTGTCTTGTAGAGAAGTTTCTTCGTATTTGCAGTCTCTTTTGGGTCATAGCGGCACACAATTACAAATCAGTTATGGGAATGAGAATATGCAGCAGGAACACAGAGTTACAACTGAAAACTCTGTAGGTGTTCCCCACGAGCATCAAGATGATCGACAGATTGTTGCAACTAACTCCGATGTGCCTATATTGTCTGATTCTAATGAACGTTTGAAGGAAGTGGCCTTATTGGGGATGGACAATCTTGCAGATGTACAAATACATGACCTATTTGAATGTCACAAATGCAACATGACCTTTGACGACAAGGATTCATACTTGCAGCATCTGCTGTCATTTCATCAGAGGATAACAAGGCGGTATCGTGTTGGTTCTTCTGTTGGAGATGGAGTTATAATTAAAGATGGAACATTTGAGTGCCAGTTCTGCCATAAGGTGTTTACGGAAAGGCGTCGTTACAATGGTCATGTGGGGATCCATGTTAGGAATTATGTGAGAAGAGGTGAAGATTCGTCAGGCCAGGAAAATGACCAAAGGAGAGACAAGTCTCCAATCAGGGAGGGCATGCCTTCAAGGCTCTCTAAGATGGATGCCCTTATTGAAATTGCTCAAAGCTCTATTATGGAGGATTCTGTCATGGAACACACTTCAGAAATTGTTGTCGGTGACTTAGATCAAGACATGAGCTTCGAGTCTCCCATCAGTGAACAGCAAATGGAAGATAGCTTGACTGACAAAAATGTGGTTCAAGATTTAACTCAGCAAGATAGTCCACATTTACTTGTGGATGGAGAAGTAGAAGAACTTGATGATGATAGCCAAGTTATAGATGCAAAAATGATTAGTTGTCTGGATAACATTGGTTTGTTATCTGTACGTGAGTATGATGTTCTTCCATCTGAGACTTGTAAGGGAAAAGATGACGTGGCCTTGTCTGCTGAGGGATCTGATAAGTCTGGGATTGTTTTGGAAGGAGCTTCCCATGGCCCTTTGCTTCCTTCATCTGGCAATAATAAAAAACCTGAATCTGGGAAGACAGAAAATTTTGTTTGCCAAAGTACTAATGGGCAGTTTAAGCTTGATGAAGACTATATTAATAAGAACGAGATAAATATTGTTTCAGATGGCTTCAAGGATGTACCTGTCAGTATGAATGTCCAAGAGATGTTAATGCCAGCTTGTGAAGAAAATGTGATCCACTATAAGATTTCTAACCCCACCATATCTCAGAAGCAATCTTCGGATTGTTTTCTGGCATTCAGCTCAGATAAGGAAGGAAAACAATTTGACAGTGTTGATCATGAGCATGAAAATGTGAAGGGTTTCCAGGAACTTGGGTTGGATGAAATAGGTACTCTTGAGTATGATTTTGCAAGTGGTCAAGATTCTGTTTCACGGCCTGATGTGCATACTGATTTACTATGCAAGGCAGTGATGCAAGGGACTTATGCCTCCTCCATTCAGATTGAATCACAAGGAGTTATGTTAAATATGGATGGCAGAAATCAGCTTACAACTCTGTGTGTGTGGTGTGGAGTAGAGTTCGATCATGATGCTGCTAATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGTCCAGCTTGTAAGGCAAAAATCTCTGGTCAAATCAATGTGCTAGATAGTGGATCACCGAATGCTGAGCATCTTTAG 1980 0.4338 MEIVNKNGVAIDLAALAEKEDPFAEELRRRTEGLKGEEELLGFLRDLEGQWGSRRRKRRIVDAADFGDVLPLGWKLLLGLKRKDGHARIYCRRYMSPSGQQFVSCREVSSYLQSLLGHSGTQLQISYGNENMQQEHRVTTENSVGVPHEHQDDRQIVATNSDVPILSDSNERLKEVALLGMDNLADVQIHDLFECHKCNMTFDDKDSYLQHLLSFHQRITRRYRVGSSVGDGVIIKDGTFECQFCHKVFTERRRYNGHVGIHVRNYVRRGEDSSGQENDQRRDKSPIREGMPSRLSKMDALIEIAQSSIMEDSVMEHTSEIVVGDLDQDMSFESPISEQQMEDSLTDKNVVQDLTQQDSPHLLVDGEVEELDDDSQVIDAKMISCLDNIGLLSVREYDVLPSETCKGKDDVALSAEGSDKSGIVLEGASHGPLLPSSGNNKKPESGKTENFVCQSTNGQFKLDEDYINKNEINIVSDGFKDVPVSMNVQEMLMPACEENVIHYKISNPTISQKQSSDCFLAFSSDKEGKQFDSVDHEHENVKGFQELGLDEIGTLEYDFASGQDSVSRPDVHTDLLCKAVMQGTYASSIQIESQGVMLNMDGRNQLTTLCVWCGVEFDHDAANSEIQPDSVGFMCPACKAKISGQINVLDSGSPNAEHL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0184 659 ProSiteProfiles Zinc finger C2H2 type domain profile. 240 267 IPR013087 -
Dod03g0184 659 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 648 IPR037472 -
Dod03g0184 659 ProSitePatterns Zinc finger C2H2 type domain signature. 242 262 IPR013087 -
Dod03g0184 659 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 1 648 - -
Dod03g0184 659 ProSitePatterns Zinc finger C2H2 type domain signature. 195 216 IPR013087 -
Dod03g0184 659 SMART c2h2final6 240 262 IPR013087 -
Dod03g0184 659 SMART c2h2final6 193 216 IPR013087 -
Dod03g0184 659 MobiDBLite consensus disorder prediction 427 448 - -
Dod03g0184 659 Gene3D Classic Zinc Finger 182 265 - -
Dod03g0184 659 MobiDBLite consensus disorder prediction 433 448 - -
Dod03g0184 659 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 60 132 IPR001739 GO:0003677
Dod03g0184 659 MobiDBLite consensus disorder prediction 267 290 - -
Dod03g0184 659 Gene3D - 49 156 - -
Dod03g0184 659 MobiDBLite consensus disorder prediction 267 292 - -
Dod03g0184 659 ProSiteProfiles Zinc finger C2H2 type domain profile. 193 216 IPR013087 -
Dod03g0184 659 SUPERFAMILY DNA-binding domain 66 117 IPR016177 GO:0003677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod03g0184 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0184 - - lang:109329666 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0184 03 1944378 1949620 Dod03g0184 03 1944378 1949620 ECH