Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0179 ATGGATAGTCTCTGTTGCTTCAGCTCTGTCAGTCAGGTGGTTGGAGGCCGTTCTTCATGTAGCTCTGGCAAGGGCAAGAGCCATCACTGCGCAGTCAAGTATGGCTTTAGTCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTGGCAAAATTTGTTCAGATGAGAGGGCAAGAGCTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACACTGTACCAGCCTATTTACAAAAGAATCTATTTTCTAATATCTTGAAGGAAGAGGACTTCTGGACTGATCCAAACAGTTCCATCATTAAAGCTTACGAGACAACGGATCAGGCAATTCTTTCTCACAATCCTGATTTGGGGCGAGGTGGATCAACTGCGGTGACTGCAATTCTTATAAATAACCAGAAATTATGGATAGCAAATGTTGGAGATTCACGAGCAGTTCTGTCACGGATAGGGGTGGCTGTACAGATGACTGTTGATCATGAGCCCAATACTGAAAGGGGCATCATCGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGAGTGAACGGGCAGCTTGCAGTCTCTCGAGCATTCGGAGACAAAAACCTCAAATCACACTTGCGATCGGATCCTGACGTACAACATCGTGATATTGACCCAGATACCGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATGGCAATAAGGATCAAAGATCCACAAAAAGCAGCCAAACAGCTAGCTGCTGAAGCCTTGAACAGGGACAGTAAGGATGACATTTCCTGCATTGTAGTTCGTTTCAAGTGA 846 0.4492 MDSLCCFSSVSQVVGGRSSCSSGKGKSHHCAVKYGFSLVKGKANHPMEDYHVAKFVQMRGQELGLFAIYDGHLGDTVPAYLQKNLFSNILKEEDFWTDPNSSIIKAYETTDQAILSHNPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRIGVAVQMTVDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVQHRDIDPDTELLILASDGLWKVMANQEAVDMAIRIKDPQKAAKQLAAEALNRDSKDDISCIVVRFK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0179 281 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Dod03g0179 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Dod03g0179 281 Gene3D - 17 281 IPR036457 -
Dod03g0179 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Dod03g0179 281 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Dod03g0179 281 SMART PP2C_4 29 278 IPR001932 -
Dod03g0179 281 PANTHER PROTEIN PHOSPHATASE 2C 1 280 IPR015655 GO:0004722|GO:0006470
Dod03g0179 281 CDD PP2Cc 32 280 IPR001932 -
Dod03g0179 281 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0179 Dod-Chr3 1921727 1926906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0179 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.035 1.19e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0179 K17506 - gmx:100787659 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1680 04 39283317 39289717 Dod03g0179 03 1921727 1926906 PCT