Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0178 ATGGCGGAGCATCCTTCTTACGGATTGGGTCCTCGATTGGATTTTCAGCAGTTGCAGTTTGAAGCCCAGCATCGCTGGTTGAGACCAGCAGAAATCTGTGGAATTCTTCGTAATTATCGGATGTTTCAAATCACATCAGAACCTCATAACAGGCCACCAAGTGGTTCACTATTTCTTTTTGATCGGAAGGTTTTGAGATACTTCAGAAAGGATGGGCATAACTGGAGAAAGAAAAAAGACGGGAAAACTGTGAAAGAAGCTCATGAAAAATTGAAGGTGGGAAGTGTTGATGTGCTGCACTGCTACTATGCCCATGGTGAGGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGACATGATGCACATAGTATTTGTACACTATTTGGAAGTTAAGGGTAACAAGACAAATATTGGAGGAAATACAGATAGTGATGAGGTTACGTCAGATTCCCAGAAGGTCACCTTTTCTTCATTGAGTGCGGACTCCATGAGTCATACCAGCTGTTTGACATCTTTACGTGAAGATGCTGATTCTGAGGAAATTCACCAACCAAGTTCTGGATTACGCACATTACGTGAGTCGCAACATATGGGGAATGGCCCCCCAACTGACAAAATTGATGCTGGTTCAAATGGTTCATTTGTTATGCATCCCTGTTCAGGTGATCAAGGACAATCATCAATTTCTGCAACAGATTATATCCCACTTGTTCAGGGGGATAAATTTAGAGGAAGTGATGCTACATATGTTGATAGCCAGAAAGCACATAGCATGGCATCCTGGGGCACAGTTTTGGAGCAATGCTCTAGAGAATTGCATAATGATCGTTCTCTTTCATTTCCTTCCATCCCATCAAGTTCAATGGGAACTGTCCTTGAACAAGAACATAATGATTTTGGTAACCTTTTAGCTAGCAAAAGTGGCCTTACTGAGGAGGCAAGGAGCTCTCCGTCTCTCCAATCAACTTGGCAGATTCCGTTTGAAGACAATTCAGGGCGCTTGCCAAACTTAACCCAATCATCAAGTTTGGAATTTGGGTCCGACTATATAACTAGTTTACTAGGGAATGAAACTCATAATGCAAGTTCTGAAATTGCTCCCCACCTGCTTGGTTTTCATGGTGAGCTGAAAGAGCTGCATGTGCAGCAAAACTATTCAGAACAGCATGCAGATGGACAATCTCGACATGCATCTCAATCCATTTCTATGAATAAAGTTTCTGGTGAAGAAAGTATCAACTATGCGTTCACAACAAAGCGTACATTATTGGATGGAGATGAGAGCCTGAAGAAGGTTGATAGCTTCTCCCGGTGGATTACTAAAGCACTTGGAGAAGTGGATGATTTAAATATGCAGGCCTCTGCTGGTATTTCATGGAGTACAGATGAATGTGGGCATGTGATAGATGATGCCTCGTTGAGCCCATCCCTCTCACAGGACCAGTTGTTCAGCATAAATGATTTTTCACCTAAATGGGCTTATGCTGAAGTGGAAACTGAGGTGTTAATTATTGGAGTATTTTTGAAGCATCAACCAGAGGCAACAACCGATAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTTTTAGCAAATGGAATTCTGTGCTGTCAAGCTCCACCTCATAAGGTTGGGCGGGTCCCTTTCTATGTGACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGGGAATTCGATTACAGAGAGGGCTTTTCTGGGAATATAGATTTTGCAGATTGTTATAACAGTTCAACTGAAATGTTGCTTCATTTGCGACTGGAAGAGCTCCTTTCTTTAAAACCAGTGTACCCATCTAATGAAACCTTTGAGAGCGATATGGAGAAAAAAAACTTGGTTTTTAAGCTTATTTCACTGAAAGAGGAAGAGGAATATTCAAGTAAGGAAGAGCCATCTGTAGAGTCAGATATATCATCAATCAAGGTGAAGGAGCATCTGTTGCACAGGCAGGTTAAAGAGAAGCTGTACTCATGGCTTCTGCATAAAGTCGCTGAAAGTGGTAAAGGGCCAAATGTATTAGATAAGGATGGGCACGGTGTTTTACACTTAGCAGCTGCTCTTGGTTATGATTGGGCTATAAAACCAATTTTAACTGCTGGAGTTAATATTAATTTCCGTGATGTGAATGGATGGACGGCTCTACATTGGGCTGCTTCCTGTGGCAGAGAGCGGACGGTTGCTGTTCTTGTCTCCATGGGTGCAAACTCTGGAGCATTGACGGATCCAACTCCAGCATTTCCCTTGGGTAGACCACCTGCAGATCTTGCCTCGAGCAATGGGCACAAAGGAATCTCTGGTTTTCTTGGCGAGTCTTTATTAACTAGCCATCTTGAATCCCTCACAATGGATGATCAATATAAAGTTGGTAGGCAAGAAATTTCAGGAATGCAAGTAGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGTTACATGGTGATATGCCAGATGCTCTCTGCCTTAAGGATTCTCTAACTGCTGTCCGTAATGCTACACAAGCTGCCGATCGTATATATCAGGTATTCAGAATGCAATCATTTCAGAGGAAGCAGTTAGATCAGTATGAAGATGACGAGTTTGGATTGTCAGATCCGCAAGCTCTTTCTCTTCTAGCTTCTAAGGCAAGCAAATCTGGACAAGGGGATGGTTTAGCCAATGCTGCTGCAGTAAAAATCCAGAAAAAGTTCCGGGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGCCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGAAGTACAAACTCATCTGGATGGTGGGAATTTTGGAGAAGGTCATATTACGCTGGAGACGCAAGGGCCGTGGTTTGCGTGGATTTCGACCTGATGCCCATAACAAGGCCCCTCCTAATCAACAAAGTGATGCTTTGAAAGAGGATGATCATGATTTTCTTAAGGAAGGAAGAAAACAAAGCGAGGAGAAGTTCCAAAAGGCCCTTTCAAGAGTGAAGTCCATGGTTCACTATCCAGAGGCACGGGCTCAATACCGGCGGGTGCTGAATGTTGTGGAGGACTTCCGCCAAACCAAGGCATCGAGTGTGGACCTGATCAATTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTTTTAGATGATGATAATTTCATTCCTATAGCATTTGATTGA 3228 0.4297 MAEHPSYGLGPRLDFQQLQFEAQHRWLRPAEICGILRNYRMFQITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKTNIGGNTDSDEVTSDSQKVTFSSLSADSMSHTSCLTSLREDADSEEIHQPSSGLRTLRESQHMGNGPPTDKIDAGSNGSFVMHPCSGDQGQSSISATDYIPLVQGDKFRGSDATYVDSQKAHSMASWGTVLEQCSRELHNDRSLSFPSIPSSSMGTVLEQEHNDFGNLLASKSGLTEEARSSPSLQSTWQIPFEDNSGRLPNLTQSSSLEFGSDYITSLLGNETHNASSEIAPHLLGFHGELKELHVQQNYSEQHADGQSRHASQSISMNKVSGEESINYAFTTKRTLLDGDESLKKVDSFSRWITKALGEVDDLNMQASAGISWSTDECGHVIDDASLSPSLSQDQLFSINDFSPKWAYAEVETEVLIIGVFLKHQPEATTDNWSCMFGEVEVPAEVLANGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDYREGFSGNIDFADCYNSSTEMLLHLRLEELLSLKPVYPSNETFESDMEKKNLVFKLISLKEEEEYSSKEEPSVESDISSIKVKEHLLHRQVKEKLYSWLLHKVAESGKGPNVLDKDGHGVLHLAAALGYDWAIKPILTAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGANSGALTDPTPAFPLGRPPADLASSNGHKGISGFLGESLLTSHLESLTMDDQYKVGRQEISGMQVVQTVSERTATPVLHGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLDQYEDDEFGLSDPQALSLLASKASKSGQGDGLANAAAVKIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKKYKLIWMVGILEKVILRWRRKGRGLRGFRPDAHNKAPPNQQSDALKEDDHDFLKEGRKQSEEKFQKALSRVKSMVHYPEARAQYRRVLNVVEDFRQTKASSVDLINSEETVDGVEDLIDIDMLLDDDNFIPIAFD* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0178 1075 ProSiteProfiles IQ motif profile. 922 947 IPR000048 GO:0005515
Dod03g0178 1075 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Dod03g0178 1075 SMART iq_5 921 943 IPR000048 GO:0005515
Dod03g0178 1075 SMART iq_5 898 920 IPR000048 GO:0005515
Dod03g0178 1075 MobiDBLite consensus disorder prediction 178 232 - -
Dod03g0178 1075 SUPERFAMILY E set domains 490 576 IPR014756 -
Dod03g0178 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 947 IPR027417 -
Dod03g0178 1075 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Dod03g0178 1075 SUPERFAMILY Ankyrin repeat 677 782 IPR036770 -
Dod03g0178 1075 Gene3D - 899 946 - -
Dod03g0178 1075 Pfam Ankyrin repeats (3 copies) 669 749 IPR002110 GO:0005515
Dod03g0178 1075 Gene3D - 657 826 IPR036770 -
Dod03g0178 1075 Pfam IPT/TIG domain 490 568 IPR002909 -
Dod03g0178 1075 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Dod03g0178 1075 Gene3D Immunoglobulins 483 578 IPR013783 -
Dod03g0178 1075 SMART ANK_2a 690 719 IPR002110 GO:0005515
Dod03g0178 1075 SMART ANK_2a 723 752 IPR002110 GO:0005515
Dod03g0178 1075 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Dod03g0178 1075 MobiDBLite consensus disorder prediction 967 986 - -
Dod03g0178 1075 SMART CG_1_2 18 136 IPR005559 GO:0003677
Dod03g0178 1075 ProSiteProfiles Ankyrin repeat region circular profile. 723 749 - -
Dod03g0178 1075 Pfam IQ calmodulin-binding motif 901 919 IPR000048 GO:0005515
Dod03g0178 1075 Pfam IQ calmodulin-binding motif 924 943 IPR000048 GO:0005515
Dod03g0178 1075 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
Dod03g0178 1075 MobiDBLite consensus disorder prediction 188 202 - -
Dod03g0178 1075 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1075 - -
Dod03g0178 1075 MobiDBLite consensus disorder prediction 313 332 - -
Dod03g0178 1075 ProSiteProfiles Ankyrin repeat region circular profile. 690 721 - -
Dod03g0178 1075 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1075 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0178 Dod-Chr3 1910075 1919598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0178 1 1056 CAMTA Transcription Factor Family AT5G64220 51.571 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dod03g0178 Ank_2 2.2e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0178 K21596 - gmx:100818124 1637.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1683 04 39298807 39307888 Dod03g0178 03 1910075 1919598 PCT