Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0163 ATGGCCAAGGGACTCGTGTACGGTTCTATTCGAGTACGTGTCCTAAAGCCGAGTCCATTGTTAAGTCCTACAGTCCAATCCCACTTTAAGTCGGATCCTACTTTGGCTGCTGGGTTACTGAGGATGCACTTCCACGACTGCTTTGTGCAAGGATGTGACGCTTCTGTGCTCATTTCTGGCACTGGCACTGAGAGAACAGCATTTCCAAACCTTGGATTAAGAGGATTTGAGGTTATCGATGATGCTAAGACACAGCTCGAGGCTGCTTGCCCAGGTGTTGTCTCTTGCGCTGATATCCTTGCCCTTGCTGCTCGTGACTCCGTTGTCCTGAGTGGAGGACTGAGTTGGCTAGTGCCCACAGGACGCAAAGATGGCCGCGTGTCACAGGCTTCTGATGTCAACAACTTGCCTGGCCCTGGTGACTCTGTTGATGTGCAAAAACAGAAGTTCGCAGCAAAGGGCCTTAACACACAAGACCTTGTAACCCTTCTTGGTGGACACACCATTGGAACAACAGCATGCCAATTTTTCAGTAACAGATTGTACAACTTCACTGCAAATGGTGGAGCTGACCCTGCCATCGACCCTTCATTTGTTTCCAATCTACAAGCACTCTGCCCGCAAAACAGTGGCGCTGCAAACCGAGTTGCGCTAGATACCGGAAGTCAACTCAAGTTTGATAACTCTTACTTCTCTAATTTGAGGAATGGGCGTGGAGTTCTGCAGTCTGATGCGGCACTCTGGAACGATGCTTCCACAAAGACATTTGTGCAGAGGTATTTGGGCCTAAGGGGCTTGCTTGGCTTGACATTCAACGTTGAATTTGGGAAGTCCATGGTTAAGATGGGCAACATTGGGGTGAAGACCGGGTATCCCGCATTCCCAACCGTCATGAACATCGATCAGATTCGTGAGATTTTGCCCCACAGGTGCGCTCCTACCTATCTCTTCACTTCTCCCAACTCCACCTCTGAAATTGTTTTCCAGTAG 990 0.4949 MAKGLVYGSIRVRVLKPSPLLSPTVQSHFKSDPTLAAGLLRMHFHDCFVQGCDASVLISGTGTERTAFPNLGLRGFEVIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWLVPTGRKDGRVSQASDVNNLPGPGDSVDVQKQKFAAKGLNTQDLVTLLGGHTIGTTACQFFSNRLYNFTANGGADPAIDPSFVSNLQALCPQNSGAANRVALDTGSQLKFDNSYFSNLRNGRGVLQSDAALWNDASTKTFVQRYLGLRGLLGLTFNVEFGKSMVKMGNIGVKTGYPAFPTVMNIDQIREILPHRCAPTYLFTSPNSTSEIVFQ* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0163 329 CDD secretory_peroxidase 24 291 IPR033905 GO:0004601|GO:0042744
Dod03g0163 329 SUPERFAMILY Heme-dependent peroxidases 21 291 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PANTHER PEROXIDASE 25-RELATED 21 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 ProSitePatterns Peroxidases active site signature. 36 47 IPR019794 GO:0004601
Dod03g0163 329 PRINTS Plant peroxidase signature 93 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 217 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 112 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 38 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 277 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 74 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 158 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Plant peroxidase signature 233 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PANTHER PEROXIDASE 21 291 - -
Dod03g0163 329 ProSiteProfiles Plant heme peroxidase family profile. 20 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 Pfam Peroxidase 24 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 Gene3D Peroxidase, domain 2 137 282 - -
Dod03g0163 329 PRINTS Haem peroxidase superfamily signature 36 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Haem peroxidase superfamily signature 219 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Haem peroxidase superfamily signature 112 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Haem peroxidase superfamily signature 94 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 PRINTS Haem peroxidase superfamily signature 159 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod03g0163 329 Gene3D - 23 290 - -
Dod03g0163 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 159 169 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0163 Dod-Chr3 1793603 1797700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0163 16 289 Peroxidase AT2G41480 64.727 2.11e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0163 K00430 - gmx:100820620 434.491