Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0161 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGTTCTTCCTTCTTGTGTGGAGGAAAGAGGAGCCAAGCCCTGCTAGCTACTGGTATTGCAGTCAAAGCTGGTGCTGCTGTTAGTCCTAAAAGGTTTGTTGTGGCTGCTGCTGCTGCACCAAAGAAGTCATGGGTCCCTGGTGTTAGAGGTGGTGGAAATTTCATCGACCCAGAATGGCTGGATGGCTCGCTACCTGGTGACTATGGTTTTGACCCACTAGGGCTAGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAACTCATTCATGGAAGGTGGGCAATGACTGCAGTTGTGGGCATCTTTGTTGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCCGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGTTCTCTTCTGGGCACACAGTTGCTCCTCATGGGGTGGGTAGAGAGCAAGAGATGGGTGGACTTCTTCAACCCGGATTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCCACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCTTTGGGCTTAGCTGGCACACTCAAGGATGGTGTTTACATTCCAGATAGGGAGAAGCTGGAGAGACTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGCTGATTTTCTACTTTGAGGCTGGGCAAGGGAAGACACCCCTTGGTGCTCTTGGCTTGTAA 777 0.5122 MAAATSGAVLNGLGSSFLCGGKRSQALLATGIAVKAGAAVSPKRFVVAAAAAPKKSWVPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLGLAGTLKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0161 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Dod03g0161 258 SUPERFAMILY Chlorophyll a-b binding protein 69 258 - -
Dod03g0161 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Dod03g0161 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Dod03g0161 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0161 Dod-Chr3 1789544 1791084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0161 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 82.558 6.56e-155 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0161 K08917 - gmx:100500118 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0161 03 1789544 1791084 Dod03g0161 03 1789544 1791084 ECH
Dod04g1702 04 39479821 39480707 Dod03g0161 03 1789544 1791084 PCT