Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0157 ATGAGTCAGCGTGTGAGTGATGAGGATATGGCAGAAGCCATAGGGGAAGCAAGAAGCGAGCCATCTTCACGTAGGCATGGTGGAGATACTTTGCCATATATTCACAAGGTTGGAGCCCCTCCTAAGCAGACACTTCTCCAAGAGATCAAGCATTCTTTCATTGAGACTTTCTTCCCAGACAAACCCTTTGTCAAATTCAAGGACCAAACCGGACCCAAAAAGTTTGTTCTTGGCCTGCAAGCAATCTTCCCCATCTTTGAATGGGGAAGAGATTACAGCTTGAAAAAATTCAGAGATTTCCTGTCTCATGCTGCCATTGTGGGGTTCATGGGTGGAGCTGCCATTACTATTGCACTGCAACAACTTAAAGGATCTTTTTCTCGCTCAGCAGTGAACTATATGGCCGGTTGTAAAACTGCAGTATCAAACATTGTTATGTCCATAATTGTATTACTAACTCTGCTAGTCATTACACCACTGTTCAAGTACACTCCAAATGCAGTGCTTGCTTCTGTTATAATAGCTGCCGTGATGAACCTGGTGAACATTGAAGCTGCTATTCTGCTGTGGAAGATTGACAAGTTCGATTTTTTAGCTTGCATGGGAGCCTTCTTCGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTGATTGCGGTGGCAATATCTTTTGCCAAAATACTTTTACAAGTGACGAGGCCAAGGACTGCTGTGCTTGGGAGGCTTCCAGGGACTACTGTTTACAGGAACATGCAGCAATACCCCAAAGCAACACAGGTTCCTGGCATGCTGATTATCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTACATCAAGGAGAGAATTTTGAGATGGCTGATTGACGAAGATGCACAAAGGACGGAAAGTGAATTACCCGGAATACAGTATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGAGTTATACAAGACCCTTCAGAAAAGAGAAGTCCAGCTCATCTTGGCGAATCCGGGGCCAATTGTGATAGAAAAGCTCCACGCATCCAAGCTCTCAGACTTAATTGGGGAAGATAAGATATTTCTCACAGTTGGTGATGCTGTTGCAACTTTTGGTCCAAAGGGTGAAAGAAGCCAAAGTTAG 1158 0.4396 MSQRVSDEDMAEAIGEARSEPSSRRHGGDTLPYIHKVGAPPKQTLLQEIKHSFIETFFPDKPFVKFKDQTGPKKFVLGLQAIFPIFEWGRDYSLKKFRDFLSHAAIVGFMGGAAITIALQQLKGSFSRSAVNYMAGCKTAVSNIVMSIIVLLTLLVITPLFKYTPNAVLASVIIAAVMNLVNIEAAILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGRLPGTTVYRNMQQYPKATQVPGMLIIRVDSAIYFSNSNYIKERILRWLIDEDAQRTESELPGIQYLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLILANPGPIVIEKLHASKLSDLIGEDKIFLTVGDAVATFGPKGERSQS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0157 385 Pfam Sulfate permease family 124 201 IPR011547 GO:0016021
Dod03g0157 385 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 124 380 - -
Dod03g0157 385 Pfam STAS domain 254 372 IPR002645 -
Dod03g0157 385 ProSiteProfiles STAS domain profile. 253 376 IPR002645 -
Dod03g0157 385 PANTHER SULFATE TRANSPORTER 19 98 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod03g0157 385 PANTHER SULFATE TRANSPORTER 124 380 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod03g0157 385 SUPERFAMILY SpoIIaa-like 255 377 IPR036513 -
Dod03g0157 385 Gene3D STAS domain 233 377 IPR036513 -
Dod03g0157 385 MobiDBLite consensus disorder prediction 1 33 - -
Dod03g0157 385 CDD STAS_SulP_like_sulfate_transporter 254 369 - -
Dod03g0157 385 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 98 - -
Dod03g0157 385 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 99 124 - -
Dod03g0157 385 PANTHER SULFATE TRANSPORTER 99 124 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod03g0157 385 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0157 Dod-Chr3 1757671 1761218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0157 21 98 Inorganic Solute Cotransporters AT4G08620 48.101 1.21e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0157 K17470 - gmx:100806204 435.261