Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0152 ATGCTTAGATGTATAACTTCTCGAGGTAACAGTGCTACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTGTTTGCAGCTCCTGCAATTGCACTTGCTTATTGGCGGAGAAGGAAACCTCAGGATCATTTCTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGATTTTCTCTGCGTGAGCTGCAAGTTGCTACAGATAACTTTAGTAACAAAAACATTCTTGGTAGAGGTGGATTTGGAAAGGTTTATAAAGGACGCTTAGCCGATGGTTCTCTTGTAGCAGTAAAAAGGCTGAAAGAGGAGCGCACACAGGGTGGAGAGCTGCAATTTCAAACAGAAGTGGAAATGATAAGCATGGCCGTGCATCGCAATTTGCTTCGGCTTCGTGGTTTTTGTATGACACCCACTGAACGGTTGCTTGTGTATCCTTTCATGGTTAATGGAAGTGTGGCATCATGTTTACGAGAACGTCAAGAATCTCAGCCGCCACTTGACTGGGAAAAACGCAAGCTTATTGCACTGGGATCTGCTAGAGGGCTTGCTTATTTGCATGATCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTGTTGGATGAAGAGTTTGAAGCAGTTGTTGGAGATTTTGGCTTAGCAAAACTTATGGATTACAAAGATACTCATGTTACTACTGCTGTTCGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGGTATGGCGTGATGCTTCTTGAACTAATTACTGGACAGAGGGCTTTTGATCTCGCAAGACTTGCCAATGATGATGATGTTATGTTGCTTGATTGGGTTAAAGGACTTCTCAAAGACAAGAAGTTGGAAACACTGGTCGATGCGGATCTAGGGGGCAATTACATTGATGAGGAGGTAGAGCAGTTAATCCAGGTGGCCTTGCTATGCACACAAGGGTCCCCTATGGAAAGGCCAAAGATGTCTGAGGTGGTGAGAATGCTAGAAGGTGATGGCCTGGCAGAAAAATGGGAGCAATGGCAGAAAGAGGAGGTGTTCCGGCAAGACTTCAACCACATCCACCACCCTACTGCACATTGGATAGTAGACTCAACTTCACATATCCAAGCAGATGAACTATCTGGTCCTAGATGA 1206 0.4461 MLRCITSRGNSATGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERQESQPPLDWEKRKLIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLGGNYIDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKEEVFRQDFNHIHHPTAHWIVDSTSHIQADELSGPR* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0152 401 Pfam Protein kinase domain 79 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0152 401 SMART serkin_6 78 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0152 401 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Dod03g0152 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dod03g0152 401 SUPERFAMILY Protein kinase-like (PK-like) 57 353 IPR011009 -
Dod03g0152 401 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 401 - -
Dod03g0152 401 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0152 401 Gene3D Phosphorylase Kinase; domain 1 47 154 - -
Dod03g0152 401 Gene3D Transferase(Phosphotransferase) domain 1 155 372 - -
Dod03g0152 401 PANTHER LRR RECEPTOR KINASE BAK1 7 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0152 Dod-Chr3 1705854 1708579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0152 26 401 Receptor kinase-like Gene Family AT4G33430 90.765 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod03g0152 Pkinase 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0152 K13416 - gmx:100305355 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0152 03 1705854 1708579 Dod03g0152 03 1705854 1708579 ECH