Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0142 ATGGTGAACGTTCCGAAGACGAAGAAGACATACTGCAAGAGCAAGGAGTGCAGGAAGCACACCCTTCACAAGGTGACCCAATACAAGAAGGGTAAGGATAGCATTGCCGCTCAGGGAAAGCGCCGTTATGACCGCAAACAGTCCGGTTATGGTGGCCAGACCAAGCCTGTTTTCCACAAGAAGGTTCTTCCCTATTGCTTCCCAATCTCTTCACATGTTTTTTTAAAGCTTATAGTTATTTATTTCATCAATACTTAG 258 0.4496 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKVLPYCFPISSHVFLKLIVIYFINT* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0142 85 Gene3D - 1 77 - -
Dod03g0142 85 MobiDBLite consensus disorder prediction 31 51 - -
Dod03g0142 85 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 2 62 IPR000552 GO:0003735|GO:0005840|GO:0006412
Dod03g0142 85 SUPERFAMILY Zn-binding ribosomal proteins 2 60 IPR011332 GO:0006412
Dod03g0142 85 Pfam Ribosomal protein L44 19 61 IPR000552 GO:0003735|GO:0005840|GO:0006412
Dod03g0142 85 PANTHER 60S RIBOSOMAL PROTEIN L44-LIKE 2 62 - -
Dod03g0142 85 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0142 Dod-Chr3 1588000 1588485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0142 1 62 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 90.323 3.99e-37 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0142 K02929 - gmx:100795041 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1718 04 39658891 39660405 Dod03g0142 03 1588000 1588485 PCT