Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0137 ATGGTTGGAAGTGTTGGTGATGTAGCTGACAATATGCGCACCAATGGAGCAGTTGAACCATTGCCTGAGGATTTTGATGCGACAGCTGTGATCACAGATCCTCTGCCACCGGTAGTTGGAGAGATTGAAAAATCGAAGAGAGAGATAGTACTGGGAAGAAATGTTCACACTATGTGTCTAGAAGTCACAGAGCCTGATGCAGATGATGAGGTTACGGGGGAACGTGAAGCTTTTATGGCGAGCGTGTTGTCCAAATACAAGAAAGCTTTGACTGAAAGGACAAAGCATCATTTAGGCTACCCTTATAATTTGGATTTTGACTATGGTGCGCTCTCACAACTTCAGCACTTTTCCATAAACAACCTGGGGGATCCATTTATTGAAAGCAATTACGGTGTCCACTCCCGGCAGTTTGAAGTTGGTGTTTTGGATTGGTTTGCCCGGTTGTGGGAACTGGAGAAAGATGAGTACTGGGGCTATATAACTAACTGTGGTACTGAAGGCAACCTCCATGGCATCCTAGTTGGGAGAGAGGTCTTTCCAGATGGGATTTTGTATGCCTCACGAGAATCACATTATTCTATTTTTAAAGCTGCTCGTATGTACAGAATGGAATGTGAAAAGGTTGCAGCTCTTTGGTCTGGGGAGATTGATTGTGATGATTTCAAGGCCAAGCTTCTTCAGCACAAGGATAAGCCAGCTATTGTAAATGTGAACATAGGTACAACTGTGAAAGGAGCTGTGGATGATCTTGATCTGGTCATAAAGACACTTGAAGATGCAGGATTCTCGCATGACAGGTTCTACATCCATTGTGATGGGGCTTTGTTTGGTCTCATGATGCCTTTTGTGAAACGTGCTCCGAAAGTTAGTTTTAAGAAGCCCATTGGCAGTGTTAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGAGCATATCAATGCTCTTTCCAGGAATGTAGAATACCTTGCTTCTAGGGATGCCACAATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCCTAAACCGGAAAGGATACAGAGGTTTTCAGAAAGAAGTACAGAAATGCTTGCGCAATTCACTATACCTCAAAGACTGCCTTGTGGATGCAGGGATTGGCGCAATGCTTAATGAGCTAAGCAACACGGTTGTGTTTGAGAGGCCACATGATGAGGAGTTTGTGCGCAGGTGGCAGTTGGCGTGCCAGGGGAACATTGCACATGTGGTAGTGATGCCAAACGTTACAAAGGAGAAGATTGATTATTTTCTGAACGAGCTTGTGGAGCACCGTGCTGCCTGGTTCAAAGATGGCAAATCTCAGCCTCATTGTATTGCACCAGATGTTGGTGAAAGCAATTGTCTTTGCACTGTGCACAAGCACAAGTAA 1431 0.45 MVGSVGDVADNMRTNGAVEPLPEDFDATAVITDPLPPVVGEIEKSKREIVLGRNVHTMCLEVTEPDADDEVTGEREAFMASVLSKYKKALTERTKHHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSIFKAARMYRMECEKVAALWSGEIDCDDFKAKLLQHKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEDAGFSHDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNSLYLKDCLVDAGIGAMLNELSNTVVFERPHDEEFVRRWQLACQGNIAHVVVMPNVTKEKIDYFLNELVEHRAAWFKDGKSQPHCIAPDVGESNCLCTVHKHK* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0137 476 PANTHER SERINE DECARBOXYLASE 1 474 - -
Dod03g0137 476 Gene3D Aspartate Aminotransferase, domain 1 357 445 IPR015422 GO:0003824
Dod03g0137 476 Pfam Pyridoxal-dependent decarboxylase conserved domain 184 387 IPR002129 GO:0016830|GO:0019752|GO:0030170
Dod03g0137 476 PANTHER - 1 474 - -
Dod03g0137 476 Gene3D - 112 356 IPR015421 GO:0003824
Dod03g0137 476 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 298 319 IPR021115 GO:0016831
Dod03g0137 476 SUPERFAMILY PLP-dependent transferases 94 448 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0137 Dod-Chr3 1567193 1571471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0137 197 382 Calmodulin-binding Proteins AT1G65960 26.154 5.17e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0137 K25193 - gmx:100785163 853.588