Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0114 ATGGCCAGAGGAGAAGAACGCAAAAAGATGAAAATTGATCTCTCTTTGCATATTGATGCCAAGCTCGAAGAAGAAAAAGAAGAAGAAGAAGTAAATGGGCAAGAAGAAGATAATGACATCGAGGAAGAAATGACACGGATACACGATGCCACAGCTGGAGAAATAGAAGATAATGCGTCTGTGGCTGCAATTTCCTTGCAAGAGAAAAACAACAAAACTATAGAGTTGAGTGTTTTACAAAAGGAGATGGATCGAGTCAAAGAGGAAAATAAAGCTCTGAGGAAAGTGGTGGAACAAACAATGAAGGACTACTATGATCTGCAAATGAAAGTTGCCGTCATTCAAGAGAACAATAAAAAAAGGATCTTATTCAGGATCATCAAAATATTTCTCTCTCAGTTCAAGACAATGCGAACACCAACAGTGAAGGACCCACCGACGATTCCTGAGATCTTTGATAACAAAACTCAAGCATCCGCATCCCCAAGAAATAAAACTGATCATGATAGCATTAGCGAGAGTGACTTGAGTTTATCACTAAGATTACAGACAAGCACAAGTCAACAAGAGAGGGAGGCAGATAAAGAAGACAATAAGGAAGAGCCGTCAAGTTTTGCACCATCAGTACTGGGGAACAAGTCAAGGGGGGCTCATGAATTGGCTGGTATTACTACAACTACGCATGCTGCAGCCTCCCATCCAAACAGAAAGCCTAGGGTTTCGGTTAGAGCTAGATGTGCGGAAGCCAAAATGAATGATGGATGCCAATGGAGAAAATATGGTCAAAAAATTGCAAAAGGAAATCCATGTCCACGTGCTTATTATCGTTGCACAGTAGCCCCAGGTTGTCCCGTTAGAAAACAGGTGCAAAGATGCCTAGATGACATGTCCATACTAATCACCACATATGAAGGGACACATAACCATCCACTGCCTGTGGGTGCAACTGCTATGGCTTCAACAGCTTCTGCAGCGGCCTCCTTCATGTTGCTAGACTCAAGCAACCCTATTTCAGATATTATTGGCACATCCAGTGCCACCCCAGCATCACTTCCTTACAATAATACTTTCCACCCTTTAAGTACTCCTCCTTCTGATATTAGAACCGCAAACCCACCAATTGATCCCTCCAAAGGGATTATTCTTGATCTCACTAGTAATGTACATGTCAACGACCCATTCCGTTTTCATACTGCTAGCTCCTCCGATGTGATGACGGCACAACCGCACTTTCCATGGATCAACAAACAAGTGGATCATGAGAGGGGTGCTCATGATAATGTGTCGTCGGCAATTGCCTCGGATCCTAAGTTCAGGGTTGCAGTTGCAGCAGCCATAACATCACTCTTCACCAATAAAGAAAGCCAAGGTGTAGGGAATTCATTTGGTCCAAGCAGTGGACAAAACGGTAGTTCTAGCCGCAGCAATAACTGGATCATAGAATCTCTCTCGAGACATGCTAAGCCCCACTGA 1473 0.4338 MARGEERKKMKIDLSLHIDAKLEEEKEEEEVNGQEEDNDIEEEMTRIHDATAGEIEDNASVAAISLQEKNNKTIELSVLQKEMDRVKEENKALRKVVEQTMKDYYDLQMKVAVIQENNKKRILFRIIKIFLSQFKTMRTPTVKDPPTIPEIFDNKTQASASPRNKTDHDSISESDLSLSLRLQTSTSQQEREADKEDNKEEPSSFAPSVLGNKSRGAHELAGITTTTHAAASHPNRKPRVSVRARCAEAKMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDIIGTSSATPASLPYNNTFHPLSTPPSDIRTANPPIDPSKGIILDLTSNVHVNDPFRFHTASSSDVMTAQPHFPWINKQVDHERGAHDNVSSAIASDPKFRVAVAAAITSLFTNKESQGVGNSFGPSSGQNGSSSRSNNWIIESLSRHAKPH* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0114 490 Pfam WRKY DNA -binding domain 252 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g0114 490 SUPERFAMILY WRKY DNA-binding domain 247 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g0114 490 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g0114 490 MobiDBLite consensus disorder prediction 454 482 - -
Dod03g0114 490 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g0114 490 MobiDBLite consensus disorder prediction 25 40 - -
Dod03g0114 490 Coils Coil 24 44 - -
Dod03g0114 490 MobiDBLite consensus disorder prediction 454 490 - -
Dod03g0114 490 Gene3D WRKY domain 236 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g0114 490 MobiDBLite consensus disorder prediction 139 212 - -
Dod03g0114 490 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 484 IPR044810 GO:0003700
Dod03g0114 490 MobiDBLite consensus disorder prediction 188 202 - -
Dod03g0114 490 Coils Coil 69 103 - -
Dod03g0114 490 MobiDBLite consensus disorder prediction 21 41 - -
Dod03g0114 490 PANTHER WRKY TRANSCRIPTION FACTOR 9-RELATED 11 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0114 Dod-Chr3 1253238 1255541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0114 10 358 WRKY Transcription Factor Family AT1G68150 45.225 7.30e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g0114 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0114 - - lang:109350732 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0114 03 1253238 1255541 Dod03g0114 03 1253238 1255541 ECH