Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0113 ATGGAGGCTCACCGGAAGCACTTCAAGCCACGCCTCGATCGCCGGAACGCCATGAAGAACATCGATTATCAAATTCCCTCTTCTCTTCCCTTCGACGACACCACCACCTCAACCTCATATTCATCTTCTTCCTTCCTTGACCTTTCTTCTTCATTCAGCAACCAAACCAGCTTCAGGGTCAAAGGCATCGACGGCGAATTTGACCACATCTTCCGCACCCTCGGCCTCTCTGGTCCCGAAGACTTCGCCATCCCAACCGCAGCTTGGGAACTTGCCCAAAAGTCTCGCCTTTCTCCATCCCTTGTTTCCAAAAACCTCAACCTTAACCTGGAGGAGCATCAGGTTCCACCTAAACGTGATAAATCTGGGGTTGGTGATATTGTGCTTAAAAATCCAAGCCTTCGACCAGTTGTTGAAGAAAACGTAAAGGGTAGTGGTGATGATGACCAGGTTAACGTTTGTTCTTCTTCTGGTTCTTCAAAGGTTTTTGGTGATGGTGGTTGTGGTGGGATCAAGGGTGTTCGGCCTCCGGTTCTTGCACCACCGCCGGTGATGTCGCGGCCACTTGTTGACGAGGTCATTTCTACTTGGGACTTGATGAGATCTTTTGCTCCCGAAGATGAAGAAGAAGCAGCTGATGATAACGATGTTCGTGTTTCAGGTGATGCAGCTTCAAGGGCACAAGATGAAAGGGTTGTTGAAGAGAGTGGTGGGGACCTGGATGTTGATGGTGGGGAGAGGAATCTTCTGGTTTCCGACTCTAGTTCTTCCACGTCTCATGATGATGATGGTGATGTCGGTGGTAAAACTGCAAGGGCTTCTTCCGGTGTGGTCGACGAGTCCAATTTTCATAACGTGTCACTAAATGGGTCGTTTAGGAGAACGTTTATCTCGTGGCAGAAGGGCGAGATTTTAGGAAAAGGGTCATTTGGAACAGTGTATGAAGGCTTCACCGATGATGGGTTCTTTTTTGCGGTGAAGGAGGTGTCTTTACTGGATGAAGGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCAATTTGAACATGAGAACATAGTCCGATATCTTGGCACAGACAAGGAGAATAACATGCTCTACATCTTCCTCGAGCTTGTAACAAAAGGATCATTGGCAAGGCTCTATCAAAAGTATAGTTTAAAAGATTCTCAAGTTTCTGCATACACAAGGCAGATTTTAAGTGGTCTGAAGTATCTCCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGGTCCGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACCAAATTAAATGATGTCAAATCAAGCAAAGGTTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAGAAACCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTTTGGAGATGTTAACACGGCAACCTCCTTATTCTCATTTAGAAGGAATGCAAGCTTTATTTAGGATTGGCAGGGGACAGCCTCCTCCTGTTCCTGAATCACTATCAAGAGATGCCCGAGACTTCATTCTTAAATGCTTACAAGTTAACCCTAGTAAACGGCCAACTGCTGCTCAACTATTGGATCATCCATTTGTAAAGAGATCGCTTCTATCCCCCATTACTCCTATTTCTCCACGCATTAATCTTCTACTGTCTTGA 1719 0.4572 MEAHRKHFKPRLDRRNAMKNIDYQIPSSLPFDDTTTSTSYSSSSFLDLSSSFSNQTSFRVKGIDGEFDHIFRTLGLSGPEDFAIPTAAWELAQKSRLSPSLVSKNLNLNLEEHQVPPKRDKSGVGDIVLKNPSLRPVVEENVKGSGDDDQVNVCSSSGSSKVFGDGGCGGIKGVRPPVLAPPPVMSRPLVDEVISTWDLMRSFAPEDEEEAADDNDVRVSGDAASRAQDERVVEESGGDLDVDGGERNLLVSDSSSSTSHDDDGDVGGKTARASSGVVDESNFHNVSLNGSFRRTFISWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDEGSQGKQSIFQLQQEISLLSQFEHENIVRYLGTDKENNMLYIFLELVTKGSLARLYQKYSLKDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQPPPVPESLSRDARDFILKCLQVNPSKRPTAAQLLDHPFVKRSLLSPITPISPRINLLLS* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0113 572 SUPERFAMILY Protein kinase-like (PK-like) 299 563 IPR011009 -
Dod03g0113 572 SMART serkin_6 299 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0113 572 Gene3D Transferase(Phosphotransferase) domain 1 298 563 - -
Dod03g0113 572 ProSiteProfiles Protein kinase domain profile. 299 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0113 572 Pfam Protein kinase domain 300 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0113 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Dod03g0113 572 MobiDBLite consensus disorder prediction 216 242 - -
Dod03g0113 572 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 169 555 - -
Dod03g0113 572 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 108 - -
Dod03g0113 572 MobiDBLite consensus disorder prediction 206 273 - -
Dod03g0113 572 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 169 555 - -
Dod03g0113 572 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 108 - -
Dod03g0113 572 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0113 Dod-Chr3 1246804 1251383 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0113 171 556 MAP Kinase Kinase Kinase AT4G08500 55.779 6.19e-141 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod03g0113 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0113 - K13414 vvi:100241228 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0113 03 1246804 1251383 Dod03g0113 03 1246804 1251383 ECH
Dod04g1754 04 39972975 39978375 Dod03g0113 03 1246804 1251383 PCT