Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0093 ATGTCCTTAACAGGCCGTCCTCGTGTTATTGTCAATGGAGTTCCAAGAACGAGAGCCTTCCACTATTTCTGGTGCCTAAATTGCCAACGCACTGTGAGGATACCCGCTACATATCCAAATGGTTCATTGTGTCCTTATTGCTTCCACAGATTACGTTATGAGCTTGACATCACAAGGCCAAGGTTACTCATGAATGTGCCTAATAACTTGGAACCATCCCCAGCTACCCAACTATTGAACAGCTTGGCTCTCATCTTTGATCCATCTCCAAGAAGGCAGCACAATCATTGGGAAACAGAAAATGATGAAGATGGTCCAAATCCACAGGCTTGGATTACCCTCAGATTTGAGAGACCAACTCGTCCACCAAGGCTTCTGCCCCCACAAGAAAACATGGTTCCACAAGCCAATAATAACACACGTAATGATGATGGTGCTGCTCATGGAAACCCTTTTGGGGATGCATTGTTAGATGACTTCATTGAAGGGGTGGTTGAGAGCAATCGACGGGGGCCACCTCCAGCAACTTCTTCAGCCATTGAAGCCTTGCCGGTGGTGAAGCTGACACAAGCCCATTTGGCAAGTGACCCCAACTGTGCAATTTGCAAAGACGAGTTTGAGGTTGATGTGCAAGTCAGGGAGTTGCCATGCAATCATTTCTACCATTCTGACTGCATTGTACCTTGGCTCCGCATGCACAACACGTGCCCCGTGTGCCGCTATGAGCTTCCAGGGGTTGCTGGTGCTGGTGGTGGTGGTAACTACCATTTCCGGAATCAGAATGAGCAGTGGTTTGAATTTGAGGAAGTTACGAGCAGCTTGAACTGGATTTGGAGACAGCTGGCTTCGATCACTCGCATCCGTGCTATCCTGGATTGGACACACAGACATTTCTTTGACTTTTGGTAA 909 0.4785 MSLTGRPRVIVNGVPRTRAFHYFWCLNCQRTVRIPATYPNGSLCPYCFHRLRYELDITRPRLLMNVPNNLEPSPATQLLNSLALIFDPSPRRQHNHWETENDEDGPNPQAWITLRFERPTRPPRLLPPQENMVPQANNNTRNDDGAAHGNPFGDALLDDFIEGVVESNRRGPPPATSSAIEALPVVKLTQAHLASDPNCAICKDEFEVDVQVRELPCNHFYHSDCIVPWLRMHNTCPVCRYELPGVAGAGGGGNYHFRNQNEQWFEFEEVTSSLNWIWRQLASITRIRAILDWTHRHFFDFW* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0093 302 MobiDBLite consensus disorder prediction 131 145 - -
Dod03g0093 302 CDD RING-H2_RNF126_like 199 240 - -
Dod03g0093 302 SUPERFAMILY RING/U-box 179 244 - -
Dod03g0093 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 246 IPR013083 -
Dod03g0093 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 21 260 - -
Dod03g0093 302 MobiDBLite consensus disorder prediction 120 150 - -
Dod03g0093 302 ProSiteProfiles Zinc finger RING-type profile. 199 240 IPR001841 -
Dod03g0093 302 SMART ring_2 199 239 IPR001841 -
Dod03g0093 302 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 21 260 - -
Dod03g0093 302 Pfam Ring finger domain 198 240 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0093 Dod-Chr3 1107162 1109486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0093 1 295 C3H Transcription Factor Family AT1G68180 32.667 1.69e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0093 K11982 - gmx:100793656 372.089