Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0071 ATGCCGAATGGTAACCTGGAGGACCATCTCTTTGCATCAAGTGACAAGAAATCACTGACTTGGCCTCAAAGGAAAAGCATAATCTTGGATGTGGCAAAGGGGTTGGCTTATTTGCACTATGGAATTAAGCCCGCAATTTTTCACAGGGATATCAAAGCCACCAATATACTACTTGATGAGGATATGAGGGCAAGAGTTGCAGATTTTGGGCTTGCTAAACAAAGCAGGGAAGGTCAATCTCATCTCACTACTAGAGTAGCGGGAACTCATGGATATCTAGCCCCGGAATATGCACTCTATGGTCAGCTCACTGAGAAGAGTGATGTCTACAGCTTCGGCGTGGTTGTTTTGGAGATAATGTGTGGGAGGAGAGCACTTGACTTGTCTTCATCAGGGTCGGCATTCTTGATCACGGATTGGGCTTGGTCATTGGTGAAATCAGGGAACATGGAAGAGGCTTTGGACGCTTCATTGTTGAAAGATGACAGCTTACCTAGCTCAAATCCTAAGAGCATCATGGAGAGATTTTTGCTGGTGGGAATTCTGTGTTCTCATGTGATGGTTGCTTTGAGGCCTACAATTGCGGATGCATTGAAGATGTTGGAAGGTGACATTGAGGTTCCACAAATCCCAGATAGGCCAATGCCTCTTGGGCACCCTTCATTTTACAACAATGATGGCAGCACTTTTAGCATATCTCCAGCACTAAGCGGCCCCAAATTGCAGGCTGGGGACATGCTCAGGTCCATTGGTGAGAGGTGA 762 0.4633 MPNGNLEDHLFASSDKKSLTWPQRKSIILDVAKGLAYLHYGIKPAIFHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRRALDLSSSGSAFLITDWAWSLVKSGNMEEALDASLLKDDSLPSSNPKSIMERFLLVGILCSHVMVALRPTIADALKMLEGDIEVPQIPDRPMPLGHPSFYNNDGSTFSISPALSGPKLQAGDMLRSIGER* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0071 253 SUPERFAMILY Protein kinase-like (PK-like) 1 202 IPR011009 -
Dod03g0071 253 Pfam Protein kinase domain 2 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0071 253 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0071 253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Dod03g0071 253 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Dod03g0071 253 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0071 253 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 246 - -
Dod03g0071 253 PANTHER OS01G0253100 PROTEIN 1 246 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0071 Dod-Chr3 915424 916746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0071 1 248 Receptor kinase-like Gene Family AT1G11050 78.968 4.50e-140 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Dod03g0071 Pkinase 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0071 - - gmx:100806560 440.654