Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0069 ATGGAGAGGAATTTCTGTTCATACGATCCTCACGTGGCCTCTAGCTTGAAGAAGAGTAGCAGGAAGCAGCAGCAGCAGCATGATCATGATAAAGAAGATTATATGTCTCCGTCTTTCAATCTGCAGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCCAACCAGAACCCAGTAGACTCAAAAGGGTGGATCATATCCCCAATGGATTCAAGATACAGGTGTTGGGAGAGTCTTATGGTTCTTCTGGTAGCTTATTCTGCATGGGTATATCCCTTTGAAGTTGCTTTCATGCACTCCTCACCAAATAGGAAAATATACATTGTAGACAATGTTGTTGACCTTTTCTTCGCTGTTGACATCGTCTTGACATTCTTCTTGGCTTACATTGATCGAACCACTCATCTACTAGTTCGAGACTCCAAAAAGATTGTACTGAGGTACTTGTCAACATGGTTCCTGATGGATGTGGCATCAACAATACCTTATGAGGCAATAGGGCATCTCTTAACTGGCAAACACAGAGTCAGCCTCCCTTACTTCCTGTTGGGCTTGCTCAGATTTTGGCGACTCAGACGGGTCAAGCAATTCTTCACAAGGCTTGAGAAAGACATCAGGTTCAGCTATTTGTGGGTCCGATGTGCTAGGCTTCTCTCTGTAACACTTTTTTCGGTTCATTGTGCTGGGTGCCTGTATTACTTGCTCGCGGATCGCTACCCCCACCAAGGAAAGACATGGATTGGAGCAGTGATCCCAAACTTCAGAGAGACAAGCCTTTGGATCAGATACATTTCAGCCATGTACTGGTCCATCACCACCATGTCCACTGTAGGTTATGGAGACCTCCACGCTGTGAACACCATGGAGATGATCTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACCGCTTACTTGATTGGCAACATGACAAATCTTGTCGTTGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGCATTGAAGCGGCATCAAACTTTGTGTGCCGAAATCGGCTGCCTCCAAGGTTGAAAGAGCAGATCCTGGCTTACATGTGTTTAAGATTTAAAGCTGAGAGCTTGAATCAGCATCATCTTATTGAGCAGCTACCAAAGTCCATTTGCCAAAGCATCTGCCAGCATTTGTTTTTTGCAACTGCAGAGAAAGCTTATCTTTTCAAAGGCGTCTCAAAAGAAATTCTCCTGTCCTTGGTTGCAAAAATGAAGGCAGAATACATACCACCCAGAGAGGATGTTATCATGCAAAATGAAGCACCTGATGATGTCTACATTATAGTGTCTGGAGAAGTGGAGATCATAGACAGTGTAATGGAGAAAGAGAGAACTTTAGGGACTCTACAAGCCGGTGACATGTTTGGAGAAATCGGTGCACTTTGTTGCAGGCCTCAGAGGTTTACCTTTAGAACAAAGACTCTCACGCAACTCTTGAGGCTGAAAACCGGTACACTTATAGAAACAATGCAGATTAAAAAGGAAGACAACATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATCTGAGTATCAGAGATTTAATGGTGGAGAATGTGGACGAAGAGGACCCTAACATGGCGGTGAACTTGTTAACTGTGGCCAGCACAGGCAATGCTGTATTTCTTGAGGAGCTTCTAAGAGCAGGTTTAGATCCTGACATTGGAGACTCCAAAGGGAAAACCCCATTGCACATAGCGGCATTAAATGGGCATGAAGAGTGTGTTAAAGTTTTACTCAAGCACGCATGCAACTTACATTTAAGAGATATCAATGGTAACACTGCATTATGGGATGCTATAGAATCAAAGCATTACTCCATATTCCGGATCCTATACCAGCTTGCTGCTCTCTCTGATCCACAGACATCAGGCGATCTCCTATGCACAGCAGCAAGAAGAAATGACTTAACAGTGATGAAGGAACTTTTAAAGCAAGGATTAAACATTAATTCCAAAGATCACCAAGGAATAACAGCAATCCAAATTGCCATGGCTGAAGATCATGTAGACATGGTTCAGTTTCTTGTCATGAATGGAGCAGATGTCACTGACGTACACACGCATGGATTTTCTGCATCCACCTTAAATGAAATGATGCAAAAGCGTGAAATTGGGCACCTAATTGCTGTAGATGAGGCCATACAAAGTGAGTTTATATTACGGGGGAGACATCAAGAAGAGCAGGAACGCTACACTTTGGGAAGATCCAATGGACTAAACTATCCAAGAGTAAGCATATACAGAGGTCACCCTATTGAGAGAAGAGAAAAAGGTTTCATGGAAGCTGGGAAGCTAATAAGGTTGCCTGATTCATTAGAGAAGCTCAAAATTATTGCAGGTGAAAAATTTGGGTTTGATGCAAAAGATGCAATGGTGACAGATGAAGAAGGAGCAGAAATAGACTGTATCGATGTGATCAGAGATAACGATAAGCTTTTTGTTGTTGTATATGCAAAGTAA 2493 0.4248 MERNFCSYDPHVASSLKKSSRKQQQQHDHDKEDYMSPSFNLQNVSKLILPPLGVSNQNPVDSKGWIISPMDSRYRCWESLMVLLVAYSAWVYPFEVAFMHSSPNRKIYIVDNVVDLFFAVDIVLTFFLAYIDRTTHLLVRDSKKIVLRYLSTWFLMDVASTIPYEAIGHLLTGKHRVSLPYFLLGLLRFWRLRRVKQFFTRLEKDIRFSYLWVRCARLLSVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVIPNFRETSLWIRYISAMYWSITTMSTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHHLIEQLPKSICQSICQHLFFATAEKAYLFKGVSKEILLSLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIIDSVMEKERTLGTLQAGDMFGEIGALCCRPQRFTFRTKTLTQLLRLKTGTLIETMQIKKEDNIQILKNFLQHFKQLKDLSIRDLMVENVDEEDPNMAVNLLTVASTGNAVFLEELLRAGLDPDIGDSKGKTPLHIAALNGHEECVKVLLKHACNLHLRDINGNTALWDAIESKHYSIFRILYQLAALSDPQTSGDLLCTAARRNDLTVMKELLKQGLNINSKDHQGITAIQIAMAEDHVDMVQFLVMNGADVTDVHTHGFSASTLNEMMQKREIGHLIAVDEAIQSEFILRGRHQEEQERYTLGRSNGLNYPRVSIYRGHPIERREKGFMEAGKLIRLPDSLEKLKIIAGEKFGFDAKDAMVTDEEGAEIDCIDVIRDNDKLFVVVYAK* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0069 830 Pfam Ankyrin repeats (3 copies) 636 694 IPR002110 GO:0005515
Dod03g0069 830 Pfam Ankyrin repeats (3 copies) 546 624 IPR002110 GO:0005515
Dod03g0069 830 ProSiteProfiles Ankyrin repeat region circular profile. 666 693 - -
Dod03g0069 830 MobiDBLite consensus disorder prediction 21 35 - -
Dod03g0069 830 SMART ANK_2a 666 695 IPR002110 GO:0005515
Dod03g0069 830 SMART ANK_2a 536 565 IPR002110 GO:0005515
Dod03g0069 830 SMART ANK_2a 602 632 IPR002110 GO:0005515
Dod03g0069 830 SMART ANK_2a 569 598 IPR002110 GO:0005515
Dod03g0069 830 SMART ANK_2a 633 662 IPR002110 GO:0005515
Dod03g0069 830 Pfam Ion transport protein 75 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod03g0069 830 PANTHER POTASSIUM CHANNEL AKT2/3-LIKE 27 828 - -
Dod03g0069 830 PANTHER POTASSIUM CHANNEL AKT1 27 828 IPR045319 GO:0005249|GO:0006813
Dod03g0069 830 Gene3D - 538 720 IPR036770 -
Dod03g0069 830 ProSiteProfiles Ankyrin repeat profile. 569 601 IPR002110 GO:0005515
Dod03g0069 830 CDD CAP_ED 394 507 IPR000595 -
Dod03g0069 830 Gene3D - 75 317 - -
Dod03g0069 830 ProSiteProfiles cAMP/cGMP binding motif profile. 394 513 IPR000595 -
Dod03g0069 830 SUPERFAMILY cAMP-binding domain-like 321 513 IPR018490 -
Dod03g0069 830 PRINTS EAG/ELK/ERG potassium channel family signature 111 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0069 830 PRINTS EAG/ELK/ERG potassium channel family signature 290 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0069 830 PRINTS EAG/ELK/ERG potassium channel family signature 264 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0069 830 PRINTS EAG/ELK/ERG potassium channel family signature 308 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0069 830 PRINTS EAG/ELK/ERG potassium channel family signature 122 131 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod03g0069 830 PRINTS Ankyrin repeat signature 570 585 IPR002110 GO:0005515
Dod03g0069 830 PRINTS Ankyrin repeat signature 649 663 IPR002110 GO:0005515
Dod03g0069 830 ProSiteProfiles Ankyrin repeat region circular profile. 569 600 - -
Dod03g0069 830 Pfam Cyclic nucleotide-binding domain 414 497 IPR000595 -
Dod03g0069 830 MobiDBLite consensus disorder prediction 1 35 - -
Dod03g0069 830 SUPERFAMILY Ankyrin repeat 501 713 IPR036770 -
Dod03g0069 830 ProSiteProfiles Ankyrin repeat profile. 666 698 IPR002110 GO:0005515
Dod03g0069 830 SUPERFAMILY Voltage-gated potassium channels 69 317 - -
Dod03g0069 830 Gene3D Jelly Rolls 361 534 IPR014710 -
Dod03g0069 830 Pfam KHA, dimerisation domain of potassium ion channel 753 825 IPR021789 -
Dod03g0069 830 ProSiteProfiles KHA domain profile. 754 830 IPR021789 -
Dod03g0069 830 SMART cnmp_10 394 511 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0069 Dod-Chr3 884433 891867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0069 14 574 Ion Channels AT4G22200 74.427 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0069 K21867 - gmx:100798422 1382.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0069 03 884433 891867 Dod03g0069 03 884433 891867 ECH