Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0061 ATGGAGAAGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTTGGGGTGGCAAGGCTCATGCGCCACAAAGAGACCAAGGAGCTCGTTGCCATGAAATACATTGAAAGGGGTCTAAAGATTGATGAGAATGTTGCTAGGGAAATCATAAACCACCGAAGTCTTCGCCATCCGAATATTATTCGGTTCAAAGAGGTGGTTTTGACTCCTACACATCTTGGAATAGTGATGGAGTATGCAGCAGGTGGAGAGCTCTTTGAGCGAATTTGCAATGCTGGAAGATTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTGTTGGATGGCAGCCCTGCTCCTCGTCTCAAGATTTGTGATTTTGGGTATTCCAAGTCATCTCTGCTTCATTCAAGGCCTAAATCAGCTGTGGGAACTCCAGCCTACATTGCACCAGAGGTTCTTCAACGAAGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGCGGAGTGACTCTTTATGTCATGCTGGTGGGAGCATACCCATTTGAGGACCAGGAGGATCCCAAAAACTTCAGGAAAACCATAAACCGAATTATGGCTGTTCAATATAAGATCCCAGACTATGTTCACATATCTCAAGACTGCAGACATCTGCTATCTCGCATTTTTTTGGCAAATCCATCAAGGAGAATCACCATTAAGGAAATCAAATCGCACCCATGGTTTCTAAAGAACTTGCCTCGGGAATTGACAGAAGTGGCTCAAGCCGTCTACTACAGAAAAGAGAACCCAACCTTTTCTCTTCAGAGCATAGAAGACATCATGAATATCGTTGAGGAGGCCAAAATTCCTCCTCCGGCTTCCAGGTCAATTGGAGGGTTCGGCTGGGGAGGAGAGGAAGAAGAGGAGGAAGCAAGAGAAGAAGGCGAGGCTGAGGCTGAGGCTGAGGCTGAGGCAGAAGAAGATGAGTATGAAAAAAGGGTCAAGGAGGCACAGGCTAGCGGAGAGTTTCATGTCAGTTGA 1077 0.4624 MEKYELVKDIGSGNFGVARLMRHKETKELVAMKYIERGLKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLGIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSAVGTPAYIAPEVLQRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFLANPSRRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKENPTFSLQSIEDIMNIVEEAKIPPPASRSIGGFGWGGEEEEEEAREEGEAEAEAEAEAEEDEYEKRVKEAQASGEFHVS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0061 358 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Dod03g0061 358 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0061 358 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Dod03g0061 358 PANTHER SERINE/THREONINE KINASE 2 352 - -
Dod03g0061 358 MobiDBLite consensus disorder prediction 315 339 - -
Dod03g0061 358 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dod03g0061 358 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0061 358 Coils Coil 316 352 - -
Dod03g0061 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Dod03g0061 358 SUPERFAMILY Protein kinase-like (PK-like) 2 296 IPR011009 -
Dod03g0061 358 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0061 358 CDD STKc_SnRK2 3 259 - -
Dod03g0061 358 MobiDBLite consensus disorder prediction 306 358 - -
Dod03g0061 358 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0061 Dod-Chr3 811389 814819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0061 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.963 6.68e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dod03g0061 Pkinase 7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0061 K14498 - gmx:100812259 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0061 03 811389 814819 Dod03g0061 03 811389 814819 ECH