Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0054 ATGGCTGTACATACAAAATCCCGTCTTATTGCTTACTCCGAAGAGATTATAGATGGGCAACCTATTTATGTTTCTTCAAACTGTCTTCCTATCAAGGCTCTGAAATTTGAACCAGCAGGTCATGCCTTCCATTCTGCTGTGCTTAAGCTTCTTGGTGTTCAGGAAAATAATGAAGCTGATACTAAAAAGGCAGTTGATGATAAGGAACAGACATATTTCTTGTCTGATTCCTATAGCAGCAAGAGCAAAAAGAAATCTGGTACTGGAGACAAACAGCAAGATCACTATGCATTGTTGGGGCTGAGCCATCTAAGATATCTTGCTACAGAGGATCAAATACGTAAAAGCTACCGTGAAACTGCCTTGAGGTTTCATCCTGACAAACAGGCTGCTCTGCTTCTTGCTGAGGAAACTGAAGCTGCAAAGCAGGCAAAGAAAGATGACATAGAGAGTCACTTCAAGGCAATCCAGGAAGCATACGAGGTTCTGATTGATCCTGTGAAAAGAAGAATTTATGATTCCACTGATGAGTTTGATGATGAGATTCCAACGGACTGTGCTCTGCAAGACTTCTTCAAGGTGTTTGGCCCTGCTTTTATGAGAAATGGGCGGTGGTCAGTAAATCAACCAGTTCCATCACTAGGTGATGATAATAGCCCAATAAAAGAAGTTGATAATTTCTACAATTTTTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCCCATGCTGATGAGTTTGATCTCGAGCAAGCTGAGTCCCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAACTGACTGAGAAAGCTAGAAAGGAAGAATATGCTCGGATACGTTCTCTTGTTGATAATGCTTATAAGAGGGACCCAAGGATATTGAGAAGAAAGGAAGAGGAGAAAGCTGAGAAGCAAAGGAAAAAGGAGGCTAAAATCCAGGCAAAGAGGATGCAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCGACGCAAGTTGGAGGAAGAGAAACAAGCCGCAGAAGCTGCTTTACAGCAGAAGAAGGTGAAGGAGAAAGAGAAAAAGCTCTTGCGGAAGGAGCGAACACGGCTTCGAACTCTCTCTGGACCTATGTTGTCTCGACATTCACTTGGTATTTCTGATGATGATGTAGAAAAGCTTTGCATGTCACTTGATACTGAGCAGCTGAGGAGTTTGTGTGAAAAAATGGAAGGCAAAGAGGTCTCGGAGCAGGTAGAAGTTCTAAGAGATGCACTGAATTGTAAGAAAGATAAGGTTGACAGCAAAGGGGAGAAAACCAATCAACAAAATGGTTCCACCAAGGCTAATGGCATGGCTTCTCTAAGCAACATTGAGAAGAAGGAGAAACCTTGGACTAAAGAAGAGATTGATCTATTGAGGAAAGGAATGCAAAAATATCCCAAAGGAACTTCACGGAGATGGGAGGTTATTTCAGAATACATTGGTACGGGAAGATCTGTGGAAGACATCATGAAGGCAACTAAAACTGTTCTCCTTCAGAAGCCTGATTCTTCCAAGGCTTTTGATGCATTTCTCGAGAAAAGGAAACCTGCTGTACAATCAATTGCTTCTCCGCTGACAACCAGAGAAGAATTAGAAGGGGCATCAGCTCCTGGGAAGCCTGAAAGTAGTGCTGCCACAGCATCAAATAACTCGGAAGACTCTAATAGACAAAATACAGATAACCAGAACCCTACTGGTTCTGCTGCTGCAAATGGAGTTCCCTCTAGTTCAGAACAAGACTCGTGGTCCTGCAGTACAGGAAAGGGCCCTGGTTCAAGCTTTGAAAGCCTTCCCAAAGGAAACTAG 1833 0.4321 MAVHTKSRLIAYSEEIIDGQPIYVSSNCLPIKALKFEPAGHAFHSAVLKLLGVQENNEADTKKAVDDKEQTYFLSDSYSSKSKKKSGTGDKQQDHYALLGLSHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEAAKQAKKDDIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCALQDFFKVFGPAFMRNGRWSVNQPVPSLGDDNSPIKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLTEKARKEEYARIRSLVDNAYKRDPRILRRKEEEKAEKQRKKEAKIQAKRMQEEEAARIAEEERRRKLEEEKQAAEAALQQKKVKEKEKKLLRKERTRLRTLSGPMLSRHSLGISDDDVEKLCMSLDTEQLRSLCEKMEGKEVSEQVEVLRDALNCKKDKVDSKGEKTNQQNGSTKANGMASLSNIEKKEKPWTKEEIDLLRKGMQKYPKGTSRRWEVISEYIGTGRSVEDIMKATKTVLLQKPDSSKAFDAFLEKRKPAVQSIASPLTTREELEGASAPGKPESSAATASNNSEDSNRQNTDNQNPTGSAAANGVPSSSEQDSWSCSTGKGPGSSFESLPKGN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0054 610 Coils Coil 294 363 - -
Dod03g0054 610 CDD DnaJ 94 165 IPR001623 -
Dod03g0054 610 PRINTS DnaJ domain signature 148 168 IPR001623 -
Dod03g0054 610 PRINTS DnaJ domain signature 99 117 IPR001623 -
Dod03g0054 610 PRINTS DnaJ domain signature 117 132 IPR001623 -
Dod03g0054 610 Gene3D DnaJ domain 77 186 IPR036869 -
Dod03g0054 610 MobiDBLite consensus disorder prediction 425 456 - -
Dod03g0054 610 MobiDBLite consensus disorder prediction 522 610 - -
Dod03g0054 610 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Dod03g0054 610 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 594 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Dod03g0054 610 SUPERFAMILY Homeodomain-like 457 501 IPR009057 -
Dod03g0054 610 Gene3D - 451 509 - -
Dod03g0054 610 MobiDBLite consensus disorder prediction 294 324 - -
Dod03g0054 610 SUPERFAMILY Chaperone J-domain 67 172 IPR036869 -
Dod03g0054 610 MobiDBLite consensus disorder prediction 550 601 - -
Dod03g0054 610 SMART dnaj_3 93 168 IPR001623 -
Dod03g0054 610 Pfam Myb-like DNA-binding domain 457 498 IPR001005 -
Dod03g0054 610 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 1 594 - -
Dod03g0054 610 ProSiteProfiles dnaJ domain profile. 94 176 IPR001623 -
Dod03g0054 610 Pfam DnaJ domain 94 173 IPR001623 -
Dod03g0054 610 ProSiteProfiles Myb-like domain profile. 451 506 IPR001005 -
Dod03g0054 610 MobiDBLite consensus disorder prediction 433 448 - -
Dod03g0054 610 CDD SANT 458 500 IPR001005 -
Dod03g0054 610 SMART sant 455 508 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0054 Dod-Chr3 746994 751457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0054 95 294 C2H2 Transcription Factor Family AT1G74250 30.126 5.79e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod03g0054 DnaJ 2.5e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0054 K09522 - gmx:100806665 845.114