Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0052 ATGCCAACTGCTCTTTTCCGTGTTGATATTTGGTCTATGGTGAGGGTGTCAATATACAACTTGCAGCTATTTCGCCACGTGGAGCCACCTGGTTGGAGATTGGGGTGGGCTTGGAAAGGTGATGAGGTGATATGGGCAATGTGGGGAGCAGAGGCAACCGAGCAAGGGAACTGCTCAAGATTCAGAGGGCAAGAGAAGCCCCATTGTTGTGAGAAGGAGCCATTTATCATTGATCTTATGCCTGGAGCACCATACAATCAGCAATATGCTAATTGCTGCAAAGGAGGGGTCCTAACGTCCATGACTCAGGACATAACCAAACATGCCGCAGCCTTTCAGCTGAATTACAACAAGGCAACAGCCTACCTTCCAGATGGCAATGTTGGCGACCCAGTTGCAGATGGCAATTTTAACATGCCAGAAAACTTCACGCTTGGAATTCCTGGTTATAGTTGTGGGGCACCCTATCAAGTCCCACCAACCAAGTTTACCTCAGATGGACACCGGTGGCAGCAAGTCTTAGCGACGTGGAACGTGACCTGTATTTACTCGCAGTTTCTAGCATCGCCTGCTCCGAAATGCTGTGTCTCCTTGTCTGCATTCTATAACAGTACGGTTGTTCCTTGCCCCATATGCAGCTGTAATTGCAAAGGGCTGCCAGGAGCATATTGTGTGGATCCGGATAAAACATCGGTGCTGCGACTGCCACAACAGCCATCACCAGTGGTGAAGTGTTCAAGTCACATGTGCCCCATTCGTGTCCACTGGCACGTTAAACAAAGTTATACAGAGTACTGGCGCGTCAAGATCACTATCACAAACTTAAACCTGGTCAAAAACTATTCCCAGTGGAATTTGGTGGTGTTACACCCCAGCTTGCGCAGTGTGAACCAAGTTTTCAGTTTCAACTACCAGCCCCTCCCAATTTATGGAGATCTCAATGACACAGGGATGTTTTGGGGGCTACAGTACTACAATGACATGTTGCTGGAATATGGGAAGAATGGAAACGTACAAACGGAGATATTGCTGCACAAAGACAAAGGAGACTTCACCTTCAGAGAAGGATGGGCTTTTCCGAGAAAGGTTTCATTCAATGGAGAGGAGTGTGTTATGCCATCTCCTGACCACTACCCCAGGCTCCCCAATACAGCAGCACATGCTGTCACAACAACCCCTTTCCTACTTTTATTCTCCTTGTTACTGCTCTCAATTTTCTTCTAA 1224 0.4763 MPTALFRVDIWSMVRVSIYNLQLFRHVEPPGWRLGWAWKGDEVIWAMWGAEATEQGNCSRFRGQEKPHCCEKEPFIIDLMPGAPYNQQYANCCKGGVLTSMTQDITKHAAAFQLNYNKATAYLPDGNVGDPVADGNFNMPENFTLGIPGYSCGAPYQVPPTKFTSDGHRWQQVLATWNVTCIYSQFLASPAPKCCVSLSAFYNSTVVPCPICSCNCKGLPGAYCVDPDKTSVLRLPQQPSPVVKCSSHMCPIRVHWHVKQSYTEYWRVKITITNLNLVKNYSQWNLVVLHPSLRSVNQVFSFNYQPLPIYGDLNDTGMFWGLQYYNDMLLEYGKNGNVQTEILLHKDKGDFTFREGWAFPRKVSFNGEECVMPSPDHYPRLPNTAAHAVTTTPFLLLFSLLLLSIFF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0052 407 PANTHER PROTEIN COBRA 13 404 IPR006918 GO:0010215|GO:0031225
Dod03g0052 407 PIRSF COBRA 6 407 IPR006918 GO:0010215|GO:0031225
Dod03g0052 407 PANTHER COBRA-LIKE PROTEIN 6 13 404 - -
Dod03g0052 407 Pfam COBRA-like protein 13 184 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0052 Dod-Chr3 717584 720410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0052 14 382 COBRA Gene Family AT1G09790 58.511 1.63e-153 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0052 - - lang:109329241 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0052 03 717584 720410 Dod03g0052 03 717584 720410 ECH