Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0047 ATGGTTCCCTCCACGAATGGCTCCACGCTTCGAAAACGGCACCACCGTCAGTGGCCTAAGCGCGTGGAAATCGCCATGCAGACTGCACGTGCGGTGCAGTTCCTCCACGAAGGCAAGCCCCTGGTGATCCACAGAGACATCAAGTCCACCAACATCTTGTTCGATTCTCAATGGAATGCCAAGTTGGCAGATTTTGGACTTGCGGTCACAGCAGGAGGAGTTGACCCACTGCCACTGTCACTGAGTCAACCCGCTGGGACAATAGGGTACATGGACCCGTGTTACACCGCGCCAAGTAAACTCAGCACCAAAAACGATATGTTCAGCTTTGGGGTTGTGTTGTTGGAGATCATCAGTGGTAGAAAGGCCATTGATGTGTGCAAAACGCCCGCTTCGGTTGTGGAATGGGCCGTTCCATTAATCATCGATCAGCAACGAGTAATTCTGGAGGGAATTTGCGACCCGAGAATGGCAGTGCCTGGAGGTGCACACATGGCGAGCACCATTGCTCAGTTCCTGCGCGAGGCTGCGCGCTGTGTGTCGCCAAACGAAGGTGATCGTCCGTCTGCAGGGGAAGTGGTTATGGGAATGGAAAGTTGCTTCGTGGAACGCGTCAGTGTCAGGTACCCCTTTTGGACGAGCTCCTTGAGGAGTATGGTTGATCGGTTGAGAAAGAGTAGGAGCAAGTTGAAGTTGGTGGTGAGTAATGTCACGCAGCATCCTTGGACGCGAGCACAAGCTGGGGAGGGTCTTGGGGTTGAGGTTGAGGTTGATGTCGATGGTGATACTACTTTGTCGAGTGGGAAGATATCCATGACCATAAGGGAGGTTTTGGCTGATGTTACCTTGGGATGA 855 0.531 MVPSTNGSTLRKRHHRQWPKRVEIAMQTARAVQFLHEGKPLVIHRDIKSTNILFDSQWNAKLADFGLAVTAGGVDPLPLSLSQPAGTIGYMDPCYTAPSKLSTKNDMFSFGVVLLEIISGRKAIDVCKTPASVVEWAVPLIIDQQRVILEGICDPRMAVPGGAHMASTIAQFLREAARCVSPNEGDRPSAGEVVMGMESCFVERVSVRYPFWTSSLRSMVDRLRKSRSKLKLVVSNVTQHPWTRAQAGEGLGVEVEVDVDGDTTLSSGKISMTIREVLADVTLG* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0047 284 Pfam Protein kinase domain 22 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0047 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 42 54 IPR008271 GO:0004672|GO:0006468
Dod03g0047 284 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0047 284 PANTHER - 17 239 - -
Dod03g0047 284 PANTHER OS01G0750732 PROTEIN 17 239 - -
Dod03g0047 284 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0047 284 Gene3D Transferase(Phosphotransferase) domain 1 7 239 - -
Dod03g0047 284 SUPERFAMILY Protein kinase-like (PK-like) 11 228 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0047 Dod-Chr3 623572 625398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0047 6 198 Receptor kinase-like Gene Family AT3G59420 42.784 3.78e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dod03g0047 Pkinase 1.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0047 - - lang:109334080 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0047 03 623572 625398 Dod03g0047 03 623572 625398 ECH