Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0046 ATGGAACTATCAGATTTGCAAAACAACAAGCAGAGCGGCCACAACAACACAGCAACAGCAGCAGCAGCAGCAGCGACATCATCAACATCCTCGCAGCAGCACCTTGTGGTCCCGTTTGATGGCAGTGCCAACAGTGCAGCGAGGCCCTTCATCATGGGCTCCATCTCCATCCAACCACCATCCACCTCTTCCTCTTCTTCGTCCTCATCGTCTTCCTCCAATTCATCCTCCTCTTCCGCCGCCGCCGCCGCCACTCCGCACCTCATCGACGCCTCCCTCGCCATCGCCACCAGATCTGCCCCACTCTCCGACAAGGCCCACCAAATCCAGGCCCAGGCCCAGGCCCAACCCGCCGCACCCAAGCGCTCCACCAAGGACAGGCACACCAAGGTCGACGGCCGCGGCCGCAGGATCCGAATGCCGGCCTCGTGCGCCGCTAGGGTTTTCCAACTGACCAGAGAATTGGGCCACAAGTCCGACGGAGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCCGCCATCATCGCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCTCCACGCTCAACGTCTCGCAACGGAGCAGCGGCTCCACGCTCTCGGCTCCGCCCTCGAAGTCCGCCCCTCACACGTTTCACGGGGCAGCTCTGGCGCTCGCTCACCACCATCACCATCCTTACGAGGAAGCGTTCCAGCACACGGCGCTGCTAGGTTTTCACCCTCAGCACCACCTCATGGCCGCTGACCAAATCGCAGAAGCGCTTCCCAGTGGCGGCGGAGACAGTGGTGGTGGTGGTGGTGATTCGGCCGACAACTATATGAGGAAACGTTTCAGAGAAGACCTGTTCAAAGATGATAGTAATAACCAGTCACAGTCACAGTCGCAAAATGAAGGCGGGGGCGGCGGCGTTGGCGATGGTTCTTCGCCGAAGCCATTCAAAACCAACCTCCAAATGCAATTGCCAAAGCAGCAACAAGCTCAGCCAGAAGGTGCTGCTGCTGGTACTGCTGCTTCTGGTTCTGGGCTTCTTCGCCCATCAAATTTGGTACCTGCCACCGCCATGTGGGCGGTGGCGCCAGCACCCACCAGCGGCGGCGCTCCCGGAAGCACAATCTGGATGCTTCCGGTTACGGCTGGCGGTGGCGGTGGTGGTGGTGGTGGTGCAGCTTCGGAGACCCAGATGTGGCCGTTTGCTCATCAGGGTGGTGGCAGTGGCGGCGGCGGCAGTGGTAACAACACGTTGCAAGCCCCGCTGCATTTCATGCCGAGGTTCAACCTTCCCGGTGGAGTTGAATTCCAAGGTGGACGCGGTGGCGGCGCCCTTCAATTGGGTTCGATGCTAATGCCGCAGCAGCCTTCTCAGCATCTGGGGCTGGCCATGTCTGACTCATCCAACTTAGGCATGCTGGCTGCTCTCAATGCTTACACCAGAGCTGGTCTGAACATGAACATGAATTCTTCTGATCAGCACTTGGAGCATCATCATCATCATCAGCACCAGCACCAACCTCAGGGTACTGATAGCGGGGAAGATGGCCCTAATAATAGTTCCCAATGA 1566 0.5951 MELSDLQNNKQSGHNNTATAAAAAATSSTSSQQHLVVPFDGSANSAARPFIMGSISIQPPSTSSSSSSSSSSSNSSSSSAAAAATPHLIDASLAIATRSAPLSDKAHQIQAQAQAQPAAPKRSTKDRHTKVDGRGRRIRMPASCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSQRSSGSTLSAPPSKSAPHTFHGAALALAHHHHHPYEEAFQHTALLGFHPQHHLMAADQIAEALPSGGGDSGGGGGDSADNYMRKRFREDLFKDDSNNQSQSQSQNEGGGGGVGDGSSPKPFKTNLQMQLPKQQQAQPEGAAAGTAASGSGLLRPSNLVPATAMWAVAPAPTSGGAPGSTIWMLPVTAGGGGGGGGGAASETQMWPFAHQGGGSGGGGSGNNTLQAPLHFMPRFNLPGGVEFQGGRGGGALQLGSMLMPQQPSQHLGLAMSDSSNLGMLAALNAYTRAGLNMNMNSSDQHLEHHHHHQHQHQPQGTDSGEDGPNNSSQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0046 521 MobiDBLite consensus disorder prediction 104 137 - -
Dod03g0046 521 MobiDBLite consensus disorder prediction 313 334 - -
Dod03g0046 521 MobiDBLite consensus disorder prediction 285 342 - -
Dod03g0046 521 MobiDBLite consensus disorder prediction 1 33 - -
Dod03g0046 521 PANTHER TRANSCRIPTION FACTOR TCP8 21 519 - -
Dod03g0046 521 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 519 IPR005333 GO:0003700
Dod03g0046 521 MobiDBLite consensus disorder prediction 289 304 - -
Dod03g0046 521 MobiDBLite consensus disorder prediction 104 119 - -
Dod03g0046 521 Pfam TCP family transcription factor 123 227 IPR017887 -
Dod03g0046 521 ProSiteProfiles TCP domain profile. 124 178 IPR017887 -
Dod03g0046 521 MobiDBLite consensus disorder prediction 50 79 - -
Dod03g0046 521 MobiDBLite consensus disorder prediction 121 137 - -
Dod03g0046 521 MobiDBLite consensus disorder prediction 492 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0046 Dod-Chr3 609274 611657 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0046 121 468 TCP Transcription Factor Family AT1G35560 42.776 4.15e-60 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod03g0046 TCP 2.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0046 - - adu:107482753 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0046 03 609274 611657 Dod03g0046 03 609274 611657 ECH