Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0029 ATGGTCCCCCTGACCCTCATTGTTGCCACTGTGTTTTCTCTCCTGGGCTGCTCTGTTTCTGCTTCATCCCTGCTCAGCGATGTCAACGTCCTAGTCTCACTCAAAGAAGGATTCCAGTTCCCACACCCACCACTGAACTCTTGGAGCACCTCAAACTTGAGCTCGGTTTGTTCATGGGCTGGAATTCAATGCCACAAGGGGCGAGTTGCGTCCCTGGACTTAACAGATTTGAACTTGTACGGCTCTGTTTCCCCTTCAATCTCAAGGCTTGATAGGCTCACCCACCTATCCCTCGCAGGCAACAACCTAACCGGCACCATTGACATCACCAACTTGACCAGCCTCCAATTCCTCAATATCTCCGACAACCAGTTCAGTGGCCACTTGGACTGGAACTACTCCACATTGGAATCCTTGCAAGTCCTTGACGCCTACAACAACAACTTCACTTCCTTGCTTCCTTTGGGGCCCCTCAGTCTGAAGAGGCTCAGGTACTTGGATCTTGGCGGCAACTACTTGTTTGGTGAAATCCCGGAGGGGTATGGAAGCTTAGCTGCGCTGGAATATCTTTCACTTGCAGGCAACGACCTTCGCGGGAAGATCCCGGGTGCGCTGGGGAACCTCACAAACCTGAGGGAGATTTACTTGGGATATTACAACTCCTTTGAAGGTGGGATTCCAGTGGAGTTTGGAAAGTTGGTGAATTTGGTGCACATGGATCTCTCAAGCTGTGACCTGGACGGTCCAGTTCCTAGAGAGCTGGGGAACTTGGAGCACCTGGACACTCTTTACTTGCATATCAATCAGCTCTCGGGTTCTATACCGAAACAGCTAGGCAACTTGACCAGCTTGGTGAACCTTGACCTCTCCAGCAATGCTCTCACCGGAGAGATCCCACTGGAGTTCATCAACCTCAAGCAGCTCAAGCTCTTCAACCTTTTCCTGAATAAGTTGCACGGCTCCATACCTGACTACATTGCAGACTTGCCTGATTTGGAGACGCTGGGGCTGTGGATGAACAACTTCACCGGAGAAATCCCGCGCAACCTTGGCCTAGCTGGGAAGCTGCAAGTCCTTGACTTGTCCTCCAACAAGCTCACTGGTGTCATTCCACCCCACCTGTGTTCCTCAAACCAGCTCAGGATCTTGATTCTCCTCAACAACTTCCTGTTTGGGCCCATACCTGATGGTATGGGAACATGTTTCAGCCTCACTAGAGTGAGGTTAGGACAGAATTACCTGAATGGCACCATTCCAAATGGCTTCCTTTACCTTCCTAAGCTAAACTTAGCAGAGTTGCAGAACAACTACTTGTCAGGAACTTTGCCAGAGAATGTTAATAGCTCCTCCCAGGCTGTTAGTTTAGCCCAGCTTGATTTGTCAAACAATGCCTTGGCTGGTCCCTTACCGAATTCACTCTCAAATTTCTCGTCCATTCAGATCCTTCTGCTCAGTGGAAACCAATTCTCGGGTCCAATTCCACCTTCCATTGGAGGACTCAACCAAGTGCTAAAGCTTGATCTAAGCAGAAACTCATTATCAGGGGAAATTCCGCCCGAAATTGGGTACTGTGCCCACCTAGCGTACCTTGACATGAGCCAGAACAATCTCTCTGGCTCCATCCCACCTGTGGTTGCCAATATCCGCATCCTGAATTACTTGAACTTGTCAAGAAACCATTTGAGCCAAGCCATCCCAAAATCAATCGGTACCATGAAAAGCCTCACCATTGCTGACTTCTCCTTCAATGAATTCTCAGGTAAGTTGCCTGAATCAGGGCAATTCGCCTTCTTTAACGCGTCGTCCTTTGCGGGAAATCCTCAACTCTGCGGGTCCCTCTTGAACAACCCATGTAACATGAGCAGAATCACATCCCCACCAGGAAAAAGCACTGCAGACTTTAAGCTAATATTTGCGCTTGGCCTGTTGGTGTGCTCCTTGGTGTTTGCGGTTGCAGCCATAATAAAGGCCAAGTCATTCAAGAAGAATGGCCCCGGTTCTTGGAAGATGACCGCATTCCAGAAGCTGGAATTCGCAGTCTCGGACATCCTTGAATGCCTGAAAGATGGCAACGTGATCGGAAGAGGAGGCGCCGGGATTGTTTACCACGGGAAAATGCCAAGTGGGGTGGAAGTTGCGGTGAAAAAACTACTGGGGTTTGGTGCAAACAGCCATGATCATGGCTTCGGAGCTGAAATTCAGACACTTGGGAACATAAGGCATAGAAACATAGTGAGGCTGCTTGCGTTCTGCTCCAACAAGGAGACCAATCTGCTGGTGTACGAGTACATGAGGAATGGGAGCCTAGGCGAGGCGTTACACGGGAAGAAGGGCGCATTCCTGAGTTGGAACTTGAGGTACAAGATTTCCATCGATTCAGCTAAAGGACTCTGCTACCTCCACCATGATTGCTCCCCCTTGATAGTCCACCGGGACGTCAAGTCCAACAACATTTTGTTGAATTCCAATTTCGAAGCACACGTGGCTGACTTCGGCCTCGCTAAGTTCTTGGTGGACAGCGGCGCCTCTGAGTACATGTCTTCCATTGCCGGCTCCTACGGCTACATTGCACCCGAATACGCTTACACATTGAGGGTGGACGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTTCTATTGGAGCTTCTAACGGGGAGGAAACCGGTGGGGGATTTCGGGGAAGGCGTGGATCTCGTACAATGGTGCAAGAAAGCAACCAATGGGCGCAAAGAAGAGGTTATGAACATAGTTGATCTTAGGCTCACGGTGGTGCCAAGAGAAGAAGCCATGCACATGCTGTTCATTGCCATGTTGTGCTTACAAGAGAACAGTGTGGAGAGACCCACCATGAGGGAAGTGGTTCAAATGCTCTCTGAATTCCCTCGGCGCTCTTCCGAGTACCACCACCAGTCTTCCTCCTCTTATTCCATGGCTCATCCACCAAGCAAAAAACTTGCGAAAGACAAACCATGTCCTCCCACTTTTAAACAAGACCTGTTAGTTTAG 3006 0.4957 MVPLTLIVATVFSLLGCSVSASSLLSDVNVLVSLKEGFQFPHPPLNSWSTSNLSSVCSWAGIQCHKGRVASLDLTDLNLYGSVSPSISRLDRLTHLSLAGNNLTGTIDITNLTSLQFLNISDNQFSGHLDWNYSTLESLQVLDAYNNNFTSLLPLGPLSLKRLRYLDLGGNYLFGEIPEGYGSLAALEYLSLAGNDLRGKIPGALGNLTNLREIYLGYYNSFEGGIPVEFGKLVNLVHMDLSSCDLDGPVPRELGNLEHLDTLYLHINQLSGSIPKQLGNLTSLVNLDLSSNALTGEIPLEFINLKQLKLFNLFLNKLHGSIPDYIADLPDLETLGLWMNNFTGEIPRNLGLAGKLQVLDLSSNKLTGVIPPHLCSSNQLRILILLNNFLFGPIPDGMGTCFSLTRVRLGQNYLNGTIPNGFLYLPKLNLAELQNNYLSGTLPENVNSSSQAVSLAQLDLSNNALAGPLPNSLSNFSSIQILLLSGNQFSGPIPPSIGGLNQVLKLDLSRNSLSGEIPPEIGYCAHLAYLDMSQNNLSGSIPPVVANIRILNYLNLSRNHLSQAIPKSIGTMKSLTIADFSFNEFSGKLPESGQFAFFNASSFAGNPQLCGSLLNNPCNMSRITSPPGKSTADFKLIFALGLLVCSLVFAVAAIIKAKSFKKNGPGSWKMTAFQKLEFAVSDILECLKDGNVIGRGGAGIVYHGKMPSGVEVAVKKLLGFGANSHDHGFGAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLSWNLRYKISIDSAKGLCYLHHDCSPLIVHRDVKSNNILLNSNFEAHVADFGLAKFLVDSGASEYMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRKPVGDFGEGVDLVQWCKKATNGRKEEVMNIVDLRLTVVPREEAMHMLFIAMLCLQENSVERPTMREVVQMLSEFPRRSSEYHHQSSSSYSMAHPPSKKLAKDKPCPPTFKQDLLV* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0029 1001 ProSiteProfiles Protein kinase domain profile. 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0029 1001 Gene3D Transferase(Phosphotransferase) domain 1 764 980 - -
Dod03g0029 1001 SUPERFAMILY RNI-like 71 414 - -
Dod03g0029 1001 PANTHER UNNAMED PRODUCT 6 966 - -
Dod03g0029 1001 MobiDBLite consensus disorder prediction 967 1001 - -
Dod03g0029 1001 Gene3D Ribonuclease Inhibitor 219 328 IPR032675 -
Dod03g0029 1001 SMART LRR_typ_2 548 572 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 136 159 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 354 377 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 160 183 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 329 353 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 257 281 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 184 207 IPR003591 -
Dod03g0029 1001 SMART LRR_typ_2 500 524 IPR003591 -
Dod03g0029 1001 ProSiteProfiles Leucine-rich repeat profile. 138 159 IPR001611 GO:0005515
Dod03g0029 1001 Gene3D Ribonuclease Inhibitor 329 621 IPR032675 -
Dod03g0029 1001 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 6 966 - -
Dod03g0029 1001 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Dod03g0029 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Dod03g0029 1001 SMART serkin_6 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0029 1001 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Dod03g0029 1001 Pfam Leucine Rich Repeat 355 375 IPR001611 GO:0005515
Dod03g0029 1001 SUPERFAMILY Protein kinase-like (PK-like) 679 957 IPR011009 -
Dod03g0029 1001 Gene3D Phosphorylase Kinase; domain 1 652 763 - -
Dod03g0029 1001 Gene3D Ribonuclease Inhibitor 135 218 IPR032675 -
Dod03g0029 1001 SUPERFAMILY L domain-like 354 611 - -
Dod03g0029 1001 Pfam Protein tyrosine and serine/threonine kinase 690 957 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0029 Dod-Chr3 483790 489292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0029 18 962 Receptor kinase-like Gene Family AT5G65700 57.544 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g0029 PK_Tyr_Ser-Thr 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0029 - - cit:102612034 1530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0029 03 483790 489292 Dod03g0029 03 483790 489292 ECH