Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0025 ATGAGGGGAGAAGGTGAGAGTAGTGCAAGTGTGGGTGTTGGGGACGATTCGGGAGCATCGTCTCCGAAGAACAAAGTGAAGTTCTTATGCAGCCATGGTGGCAAGGTTCTTCCCCGTCCCTCCGACGGCCTCCTCAAGTATGTCGGGGGCGAGACTCGCGTCATTTCTGTCCCCAGGACCGTCTCTTTCTCCGAGCTGATGAAGAAGCTGGGTGCGATGATTGATGGAGGGGACAACATGGTGCTCAAGTACCAGCTGGTCCCCGAAGATCTGGACACATTGGTATCGGTCAGAAACGAGGAAGACCTCAAGCACATGATCGACGAGCACGATCGCCACCACGGAAGCGGAGGAGCACCGCTGCTGCGTGCATTCCTGTTCCCTTGCAAGCCAGTAGTGCTAGAGAACCTGCAGCAGGCTGCGGCTGCAGCGCCACCACAACCACCGGCAAGTGAACCGTGCGCGTTGGAGCAGCGTTACATCGATGCCATCAACGGCATCGTCGTACGCACCAGCCCCAGGGCAAGGCTCGGGCTCGGGCCAAGGCTCGGGCTCAGGCTCAGCCTCAGCCCAAGCAGAGCCTTATGCAGTTGGTCTGCATGCTCTTCCCCCAAATCCAACTCCCCGGATGGCCACACTGCTGACTTGGTACATGAATCCTCCTCCTCCTCGCCCTTCCATCCTCGCCTTCCTATGATGCAGAGAGTCAGGAGCTCTCCCAGCATTACCAGCCTAAGCAACCTCCACTGCCTCACCACTATTCAACACCATGATCATCACAGTCATTTGAGCCAGAGCCAGCACCCTCCTCTTGCTGCATCATCATCATCTAGATCACCGCTACAAGATCCACAACCAGCAGCAGGAGGAGGAGGAGGAGGCGGGTTTGGGATGGGGAAGGCCACCGCCCATTATGTCATTGGCGAAGACAGATATGAGCAGCAGAGGCAATAA 954 0.5723 MRGEGESSASVGVGDDSGASSPKNKVKFLCSHGGKVLPRPSDGLLKYVGGETRVISVPRTVSFSELMKKLGAMIDGGDNMVLKYQLVPEDLDTLVSVRNEEDLKHMIDEHDRHHGSGGAPLLRAFLFPCKPVVLENLQQAAAAAPPQPPASEPCALEQRYIDAINGIVVRTSPRARLGLGPRLGLRLSLSPSRALCSWSACSSPKSNSPDGHTADLVHESSSSSPFHPRLPMMQRVRSSPSITSLSNLHCLTTIQHHDHHSHLSQSQHPPLAASSSSRSPLQDPQPAAGGGGGGGFGMGKATAHYVIGEDRYEQQRQ* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0025 317 Gene3D - 46 127 - -
Dod03g0025 317 PANTHER OS05G0427100 PROTEIN-RELATED 8 276 - -
Dod03g0025 317 SUPERFAMILY CAD & PB1 domains 42 133 - -
Dod03g0025 317 MobiDBLite consensus disorder prediction 256 302 - -
Dod03g0025 317 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g0025 317 MobiDBLite consensus disorder prediction 200 231 - -
Dod03g0025 317 Pfam PB1 domain 45 127 IPR000270 GO:0005515
Dod03g0025 317 PANTHER OS05G0427100 PROTEIN 8 276 - -
Dod03g0025 317 MobiDBLite consensus disorder prediction 265 283 - -
Dod03g0025 317 CDD PB1_UP2 29 127 - -
Dod03g0025 317 SMART PB1_new 40 129 IPR000270 GO:0005515
Dod03g0025 317 MobiDBLite consensus disorder prediction 200 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0025 Dod-Chr3 422099 423587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0025 25 169 MAP Kinase Kinase Kinase AT3G46920 41.497 1.68e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0025 - - aip:107638505 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0025 03 422099 423587 Dod03g0025 03 422099 423587 ECH