Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0024 ATGGCTTCTTCAAGCGCCCAGATACACGGCCTAGGGACCCCATCCTTCGCCGGCTCTGCCTCCTCGCTCAAGAGGCCCAATCACCGCACGGTGTTCCTGGGCCAGAGGCTCAACGCCACGCCGTTCCCGCGCTCCGCGTTTCTGAAGCTGAGGAGCAGCACGGCGCGGAGGGGCCCTCTGAGAGTGGTGAATGAGAAGGTGGTCGGCATCGATTTGGGGACGACGAACTCGGCGGTGGCGGCCATGGAGGGCGGAAAGCCGACGATAATCACGAACGCGGAGGGGCAGAGGACGACCCCTTCGGTGGTGGCGTACACCAAGAACGGGGACAGGCTGGTGGGGCAGATTGCGAAGCGGCAGGCGGTGGTGAACCCGGAGAACACGTTCTTCTCCGTCAAGAGGTTCATCGGAAGGAAGATGTCTGAGGTCGACGAGGAGTCCAAGCAGGTCTCCTACAGGGTCATTCGAGACGACAACGGCAATGTCAAGCTCGACTGCCCCGCCATCGGCAAGCAGTTCGCCGCCGAAGAGATTTCCGCTCAGGTGTTGAGGAAGCTTGTGGATGATGCTTCTAAGTTCTTGAATGATAAAGTGACCAAGGCTGTGGTCACTGTGCCTGCTTACTTCAACGATTCTCAGAGGACTGCAACAAAGGATGCTGGCCGTATTGCTGGTTTGGAAGTCCTTCGTATTATCAACGAACCAACTGCTGCCTCCTTGGCATATGGATTTGAAAAGAAGAACAATGAAACAATCCTCGTCTTTGACCTCGGAGGTGGTACTTTTGATGTCTCAGTACTTGAGGTTGGTGACGGAGTGTTCGAGGTGCTGTCTACTTCTGGAGATACACACTTGGGTGGCGATGACTTTGATAAGAGAATTGTTGATTGGCTTGCAGCAAACTTCAAGAGAGATGAAGGTATAGATCTTTTGAAAGACAAACAAGCTCTTCAGCGCCTTACTGAGACGGCTGAGAAAGCAAAAATGGAGCTTTCATCAGTTGACACAAACAAATCTCAGCAGATGGCCCCAAGCATATCGAGACCACACTTACAAGGGCTCAAGACTCCAGTTGAAAATGCATTGAGGGATGCAAAACTCTCTATCAAGGATATTGATGAGGTGATACTTGTGGGTGGATCAACACGTATCCCTGCCGTTCAGGAGCTTGTAAAGAAGATGACTGGGAAGGACCCAAATGTAGAGAGGATGGTAAAGGAAGCCGAGAGATTTTCAAAGGAGGACAAGGAGAAGAGAGATGCTATTGACACTAAGAATCAGGCGGATTCTGTTGTCTACCAGACTGAGAAGCAGTTGAAGGAACTTGGAGACAAGGTTCCTGGTCCTGTGAAGGAGAAGGTTGAAGCAAAACTTGGCGAGCTTAAAGATGCAATTTCTGGTGGTTCAACCCAAGCCATAAAGGATGCCATGGCTGCCCTCAACCAGGAAGTTATGCAACTTGGTCAGTCACTATACAACCAGCCTGGAACTGCTGCAGGCACAGGGCCTGCTGCACCCGAGTCTGGCCCAACAGAATCATCAGGCAAGGGACCCGATGGGGATGTGATCGATGCAGATTTTACCGACTCTAAATGA 1596 0.5201 MASSSAQIHGLGTPSFAGSASSLKRPNHRTVFLGQRLNATPFPRSAFLKLRSSTARRGPLRVVNEKVVGIDLGTTNSAVAAMEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVIRDDNGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAANFKRDEGIDLLKDKQALQRLTETAEKAKMELSSVDTNKSQQMAPSISRPHLQGLKTPVENALRDAKLSIKDIDEVILVGGSTRIPAVQELVKKMTGKDPNVERMVKEAERFSKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPGPVKEKVEAKLGELKDAISGGSTQAIKDAMAALNQEVMQLGQSLYNQPGTAAGTGPAAPESGPTESSGKGPDGDVIDADFTDSK* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0024 531 Coils Coil 310 337 - -
Dod03g0024 531 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 399 486 IPR029048 -
Dod03g0024 531 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 44 337 - -
Dod03g0024 531 PRINTS 70kDa heat shock protein signature 66 79 - -
Dod03g0024 531 PRINTS 70kDa heat shock protein signature 260 270 - -
Dod03g0024 531 PRINTS 70kDa heat shock protein signature 117 125 - -
Dod03g0024 531 PRINTS 70kDa heat shock protein signature 201 221 - -
Dod03g0024 531 PRINTS 70kDa heat shock protein signature 94 106 - -
Dod03g0024 531 PRINTS 70kDa heat shock protein signature 372 388 - -
Dod03g0024 531 SUPERFAMILY Actin-like ATPase domain 66 246 IPR043129 -
Dod03g0024 531 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g0024 531 Gene3D - 399 495 IPR029048 -
Dod03g0024 531 PANTHER HEAT SHOCK PROTEIN 70KDA 44 337 IPR013126 GO:0005524|GO:0140662
Dod03g0024 531 PANTHER HEAT SHOCK PROTEIN 70KDA 351 401 IPR013126 GO:0005524|GO:0140662
Dod03g0024 531 PANTHER HEAT SHOCK PROTEIN 70KDA 401 508 IPR013126 GO:0005524|GO:0140662
Dod03g0024 531 SUPERFAMILY Actin-like ATPase domain 247 401 IPR043129 -
Dod03g0024 531 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 351 401 - -
Dod03g0024 531 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 401 508 - -
Dod03g0024 531 MobiDBLite consensus disorder prediction 491 531 - -
Dod03g0024 531 ProSitePatterns Heat shock hsp70 proteins family signature 1. 70 77 IPR018181 -
Dod03g0024 531 Gene3D - 61 252 - -
Dod03g0024 531 Gene3D - 253 398 - -
Dod03g0024 531 CDD HSPA9-Ssq1-like_NBD 65 400 - -
Dod03g0024 531 Pfam Hsp70 protein 67 400 IPR013126 GO:0005524|GO:0140662
Dod03g0024 531 ProSitePatterns Heat shock hsp70 proteins family signature 2. 254 267 IPR018181 -
Dod03g0024 531 ProSitePatterns Heat shock hsp70 proteins family signature 3. 375 389 IPR018181 -
Dod03g0024 531 Gene3D Actin; Chain A, domain 4 291 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0024 Dod-Chr3 418166 421262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0024 68 455 Calmodulin-binding Proteins AT5G02500 41.686 1.75e-99 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0024 K03283 - nnu:104586953 749.969