Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0022 ATGGCCTCCGCTAGCCTTGGAAATGGTGGGGCCGGCAGTTCCAGGTCTGCTAATGCCTTCAGGGGTTCATCTAGCTCGGTGGATTGGCTCGGCAGAGAGATGCTCGAGATGAGATTGAGGGACAAGGTGGACCATGAAGATGACGACAGAGATAGTGAGCTGGACATCATTGATGGTGTGGGTGCTGAAACAGGACATGTCATAAGAACCAGCATTGGTGGCCGAAATGGTCAGTCTAGGCAGAACGTCAGTTATATCGCGGAACATGTGGTTGGAACTGGCTCTTTTGGCGTTGTTTTTCAAGCAAAATGTAGAGAAACTGGAGATATTGTAGCCATTAAGAAGGTTCTCCAGGACAAGCGCTACAAGAACAGAGAGCTACAGATAATGCAAATGCTGGATCATCCAAATATTGTTGCCCTTAGGCATTGTTTCTTTTCAACGACCGACAAAGAAGAACTTTACTTGAATCTTGTACTTGAATATGTTCCTGAAACTGTGAATCGTATTGCAAGGAACTATAGCAGAATTAATCAGCGAATGCCTTTAATATATGTAAAGCTTTATACCTACCAGATTTGCAGGGCCCTTGCTTATATACATAATTGCATTGGTATATGTCACCGTGATATCAAACCTCAGAACTTACTCGTGAACCCACACACCCATCAGCTGAAACTTTGTGATTTTGGGAGTGCAAAAGTGTTGGTGAAAGGGGAACCTAATGTTTCTTACATCTGTTCAAGATACTATCGTGCCCCAGAACTTATATTTGGCGCCACTGAATATACAACTGCCATAGATATCTGGTCAACTGGTTGTGTGATGGCTGAATTACTTCTTGGACAGCCTTTGTTTCCTGGAGAGAGTGGAGTCGATCAACTAGTTGAGATCATCAAGGTTTTGGGAACTCCAACAAGAGAGGAGATAAAGTGCATGAACCCAAATTATACCGAATTTAAGTTCCCACAGATAAAGCCTCATCCATGGCACAAGGTCTTTCAAAAGCGCTTACCCCCAGAAGCAGTGGACCTTGTCTGTAGGTTTTTTCAGTACTCTCCCAATTTGCGATGCACTGCTTTGGAAGCTTGCATTCATCCCTTCTTTGATGAGTTGAGGGACCCGAACACCCGCCTTCCTAGTGGTCGCCCACTTCCTCCTCTGTTTAATTTTAAACCTCCGGAACTTTCAGGTATACCCCCTGATGTCATCAATCGGCTTATTCCAGAGCATGCTCGTAAACAGAACTTATTTATGGCTTTGCATACCTAG 1272 0.4434 MASASLGNGGAGSSRSANAFRGSSSSVDWLGREMLEMRLRDKVDHEDDDRDSELDIIDGVGAETGHVIRTSIGGRNGQSRQNVSYIAEHVVGTGSFGVVFQAKCRETGDIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALRHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPSGRPLPPLFNFKPPELSGIPPDVINRLIPEHARKQNLFMALHT* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0022 423 ProSitePatterns Protein kinases ATP-binding region signature. 91 115 IPR017441 GO:0005524
Dod03g0022 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Dod03g0022 423 SMART serkin_6 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0022 423 Pfam Protein kinase domain 87 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0022 423 ProSiteProfiles Protein kinase domain profile. 85 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0022 423 CDD STKc_GSK3 80 372 IPR039192 -
Dod03g0022 423 PANTHER SHAGGY-RELATED PROTEIN KINASE DELTA-RELATED 1 420 - -
Dod03g0022 423 SUPERFAMILY Protein kinase-like (PK-like) 84 396 IPR011009 -
Dod03g0022 423 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g0022 423 Gene3D Transferase(Phosphotransferase) domain 1 165 413 - -
Dod03g0022 423 Gene3D Phosphorylase Kinase; domain 1 70 164 - -
Dod03g0022 423 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0022 Dod-Chr3 403711 410323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0022 91 377 Core Cell Cycle Gene Families AT1G76540 34.915 5.56e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Dod03g0022 Pkinase 2.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0022 K03083 - gmx:100799387 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0022 03 403711 410323 Dod03g0022 03 403711 410323 ECH
Dod03g0022 03 403711 410323 Dod04g2161 04 45236754 45241829 PCT