Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0008 ATGTCTCCATGGGCGGGGGGCGGTTTGGCCGATGTGGCACACAAGTTTGGAGGGTCATTGCAGGAAGAGGTGGTCCAAGTGTATACTAGAGAAATCCTTCATGGGTTGCAACATCTACGCCAACATGGGATTGTGCATTGCGACCTCAAGCGCAAGAATGGGCTTTTGGGCTCAACTGGAAACATCAAACTGGCGGATTTTGGATTTGCCAAAAGGGTGGTGAAGGGTGGTGGAGGCTTGGCAAATTCCTGCTGCCAGTCTGCTGGTGGGACTCTTCTATGGATGGCTCCTGAAGTGTTGAGGAATGAGGTGCTGGATGTTGCGACAGACATATGGTACTTGGGGTGTATAGTTATCGAGATGGCTACTGGAAGGCCTCCCTGGGTTGGCCAGGTTTCAAATCCAATGGCTGCTGTGCTAAGGATTGCCCATGGTGATGGGATACCCCAACTTCCAACCCATTTCTCGAAGGAGGGTTTGGATTCTTGA 489 0.5153 MSPWAGGGLADVAHKFGGSLQEEVVQVYTREILHGLQHLRQHGIVHCDLKRKNGLLGSTGNIKLADFGFAKRVVKGGGGLANSCCQSAGGTLLWMAPEVLRNEVLDVATDIWYLGCIVIEMATGRPPWVGQVSNPMAAVLRIAHGDGIPQLPTHFSKEGLDS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0008 162 Pfam Protein kinase domain 6 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0008 162 SMART serkin_6 5 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0008 162 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 161 - -
Dod03g0008 162 SUPERFAMILY Protein kinase-like (PK-like) 5 160 IPR011009 -
Dod03g0008 162 Gene3D Transferase(Phosphotransferase) domain 1 1 162 - -
Dod03g0008 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g0008 162 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 5 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g0008 Dod-Chr3 181968 183680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g0008 5 161 MAP Kinase Kinase Kinase AT4G36950 38.750 1.28e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod03g0008 Pkinase 6.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0008 K20716 - gmx:100798237 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0008 03 181968 183680 Dod03g0008 03 181968 183680 ECH