Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g0005 ATGAATATTGCTTATTGCTTATGTTATGTCTGTATCTATTTGTTTGTGGCAGCTAATTATTGGTCACTTTGTTTTCCCCCGAAAATATTGGACCTAGGATATCTTAAGCTAGTTATTGGAAATTATATTATGTCTGAAGAGGCCGGATCCATGTTGGTTGTTTATGATGATCCCTCTGACCAACGGTCACTATCTTTGGATGATACAAGCAGCATAGAGGAGTCACCTGATGAAACCAGGCTCTCCTTGGAAACAACTAATGATACTATTCCGTATATTGGTCAAAGGTTTACTACGCATGATGCTGCTTATGAATTCTATACTGAATTTGCCAAGAAGTGTGGCTTCTCAATTCGACGTCACCGTACAGAAGGAAAAGATGGTGTTGGAAAAGGACTCACAAGACGTTACTTTGTTTGTCACCGTGCTGGTAACACTCCTGTCAAAATATCTACCGAAAGTAAACCTCAACGAAACAGAAAATCTTCTCGATGTGGATGCCAGGCTTACATGCGGATAAGCAAGACAACAGAATTAGGAGCTCCAGAATGGCGTGTGACTGGTTTTGCTAACCACCATAATCATGAACTATTAGAACCAAACCAAGTTCGATTTCTTCCTGCATATAGAACTATTTCAGATGCTGATAAAAACCGGATCCTAATGTTTGCCAAAACAGGGATATCTGTTCACCAAATGATGAGGCTCATGGAGCTTGAGAAGTGTGTGGAACCTGGATATTTGCCTTTTACTGAAAAGGATGTGCGTAATTTACTCCAATCTTTTAGGAAATTGGATCCAGAAGAAGAAAGCCTAGATTTATTGAGAATGTGCAGAAATATAAAGGAGAAAGATCCTAATTTTAAATTTGAGTACACACTTGATACAAACAACCGTTTGGAGAATATTGCTTGGTCATATGCCTCATCAATCCAGTTGTATGATATATTTGGTGATTGTGTGGTTTTTGATACAACACACCGCCTGAATGCATTTGACATGCCACTTGGGATATGGGTTGGAATGAATAATTTTGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTACGAGATGAAACTGCAAGGTCATTTTCCTGGGCTCTGAAGGCTTTCTTAGGGTTTATGAATGGGAAGGCTCCACAGACTATATTAACTGACCAAAATATATGCCTCAAAGAAGCACTATCCACAGAAATGCCAGCAACAAAGCATGCTTTCTGCATATGGATGATAGTGGCGAAGTTTCCATCTTGGTTTAATGCTGTTCTTGGGGATCGTTACAATGAATGGAAGGCTGAATTTTATAGACTTTATAATCTTGAATCAGTTGACGATTTTGAATTAGGCTGGAGGGAAATGGTTTGTTCTTTTGGGCTGCATTCGAATCGGCATATGGTCAATTTATATAGCTCACGCTCGTTTTGGGCATTGCCATTTTTGAGAAGCAATTTTCTTGCGGGAATGACTACAACTGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGATTTTTGAGTGCACAAACTCGACTAGCACACTTTGTTGAGCAGGTAGCTGTTGCTGTGGATTTTAAAGATCAGACTGGAGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTTGCCTCAAAACAGGAGCCCCCATGGAATCTCATGCAGCCACAATCCTCACTCCTTTTGCGTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCTTCTTTTCCAATTGAAGATGGTTTTCTTGTGAGGCACCACACGAAAGCTGAGGGTGGTCGAAAAGTTTATTGGGCCCCTCAGGAAGGAATTATAAGTTGCAGCTGCCATCAGTTTGAGTTCTCTGGAATTCTCTGTAGGCATTCTCTTAGAGTTCTTTCAACAGGAAATTGCTTCCAAATCCCAGATAGATATCTTCCCATTCGCTGGCGGCGGATCAGCATACCCTCTTCTAGACTTCTTCAGAGTGCACCTAATGATCATACTGACAGGGTTCAGTTATTGCAAAGTATGGTTTCATCTCTGGTTATGGAATCTGCTAAGTCTAAGGAACGATTAGATATTGCTACGGAACAAGTTTCCATCCTTCTTTCTCGCATTAGAGAGCAACCAATTTCATTACAAGGTGCCAGAGATATTTCTTCCATCAATAGAAATCTCTGA 2169 0.403 MNIAYCLCYVCIYLFVAANYWSLCFPPKILDLGYLKLVIGNYIMSEEAGSMLVVYDDPSDQRSLSLDDTSSIEESPDETRLSLETTNDTIPYIGQRFTTHDAAYEFYTEFAKKCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKISTESKPQRNRKSSRCGCQAYMRISKTTELGAPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDADKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESLDLLRMCRNIKEKDPNFKFEYTLDTNNRLENIAWSYASSIQLYDIFGDCVVFDTTHRLNAFDMPLGIWVGMNNFGMPCFFGCVLLRDETARSFSWALKAFLGFMNGKAPQTILTDQNICLKEALSTEMPATKHAFCIWMIVAKFPSWFNAVLGDRYNEWKAEFYRLYNLESVDDFELGWREMVCSFGLHSNRHMVNLYSSRSFWALPFLRSNFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATILTPFAFSKLQEQLVLAAHYASFPIEDGFLVRHHTKAEGGRKVYWAPQEGIISCSCHQFEFSGILCRHSLRVLSTGNCFQIPDRYLPIRWRRISIPSSRLLQSAPNDHTDRVQLLQSMVSSLVMESAKSKERLDIATEQVSILLSRIREQPISLQGARDISSINRNL* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g0005 722 Pfam MULE transposase domain 321 413 IPR018289 -
Dod03g0005 722 SMART 26again6 607 634 IPR006564 GO:0008270
Dod03g0005 722 Pfam SWIM zinc finger 603 630 IPR007527 GO:0008270
Dod03g0005 722 Pfam FAR1 DNA-binding domain 105 198 IPR004330 -
Dod03g0005 722 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 61 716 - -
Dod03g0005 722 ProSiteProfiles Zinc finger SWIM-type profile. 596 632 IPR007527 GO:0008270
Dod03g0005 722 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 716 IPR031052 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dod03g0005 MULE 4.6e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g0005 - - gmx:100810717 1301.96