Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3750 ATGCCAGTCATACACACACCATCATCGTACTATTCTATCCTCAACCCACTCACCAACTATTCCTTTCCCTCCAATGCATCATCTTCCACTGTTACTGTTGCCACATTCGGATTCAGTGCCACCCCTTCCAAGTTCCAGCGCAAAACCCTTCATGCCCACATCCCAAGTCTCGGTTTTTCTACCACCAGCAACCGTTCCCGTGCTGCTGCTTCAACAATCAGAGCCAAAGCTGGAAACGATTACTATTCCACCTTGAATGTTAGCAGCAACGCTACCTTGCAAGAAATCAAGAGCGCATATAGGAAATTAGCTCGCAAGTACCATCCAGATATGAACAAAAGCCCTGGGGCAGAGGAGAAGTTCAAGGAGATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGGTCAGCCACTGCTTCCGGGGTTGATCCATTTGATTTATTTGATGCATTCTTTGGTCGTTCAGATGGACCTTTTGGCGAAAGTGGTGACGGTGGCATCAATTTCAATTTTAGAAGCAATAGAAACCATGGTCTTGATATTCGGCATGACCTCCATTTGAGCTTTGAAGAATCAATTTTTGGAGGACGGAGGGATATTGAAGTTTCTTGTTTTCAGCCTTGTGATGATTGTGATGGTACAGGGGCTAAATCAAAGGATTGCATTAAACCATGCACAAATTGTGGTGGCAGAGGAGGAGAAATGAAAACTCAGAGAACACCCTTTGGAATCATGTCTCAGGTTTCTACTTGCTCTAAGTGTGGTGGTGTTGGCAAGATAATCACTGATCACTGTCGAAGGTGTGATGGCAGTGGTCAGGTGAAATCTAAACGAAAAATGGAAGTGGTCATTCCTCCCGGCGTCAATGATGGAGACACAACACAAGTCCGAGGAGAAGGGAGTTTTGACAAGAAGAGGCGTATGATGGGGGATCTTTTTGTAGTCCTCCATGTAGATGAAAAGGAGGGAATTTGGAGAGAGGGTCTTCATTTGTACTCAAAAATTAATATTGACTTCACGGAGGCAATACTGGGGTCTGTTAAAAAGGTAGAAACTGTTGAAGGTTCAAGGGATCTCAAAATTCCTTCTGGGATTCAACCCGGAGATTCAGTGAAGTTGTCACGTTTGGGAGTTCCAAACATGAAAAGACCATCTCTTCGAGGCGATCACTACTTCGTTGTGAATGTTCTTATTCCTAAATATATCAGTGGCACCGAGCGTGTGCTCGTGGAGCAGTTAGCTTCACTTAGAGCATCTAGCAAAGATGAGTCTGTATCTTCCTTTGATGACACCGGGATCCCCAAAGGAAAATCTCATGAATCCATTAAGAGAGATCCAACAGGTCAAGCTTCAAGCAAGGGAATCAAACATGTTAGTTCTCTATGGAGATCAATTCAGAACTTCTTAAGGGGAGGACAGTCTGAAGAAAGGTTTGCTTCAATTAGCCTGGATACATCGTTGTCATTGTGGAGATTTGGCCACCAAAATCATTCGGTCCTAAATTCCTTTTGTGTTGGTTTCATTATAACTTGGTTTTTTGCGTCTTTAGCAAAGTCCAAGTACTCGTTATTTCGGAAAAGAACCCAGTCCCTCATCAATAGGACACTCGGTGAAAACAATTAA 1680 0.4345 MPVIHTPSSYYSILNPLTNYSFPSNASSSTVTVATFGFSATPSKFQRKTLHAHIPSLGFSTTSNRSRAAASTIRAKAGNDYYSTLNVSSNATLQEIKSAYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGSATASGVDPFDLFDAFFGRSDGPFGESGDGGINFNFRSNRNHGLDIRHDLHLSFEESIFGGRRDIEVSCFQPCDDCDGTGAKSKDCIKPCTNCGGRGGEMKTQRTPFGIMSQVSTCSKCGGVGKIITDHCRRCDGSGQVKSKRKMEVVIPPGVNDGDTTQVRGEGSFDKKRRMMGDLFVVLHVDEKEGIWREGLHLYSKINIDFTEAILGSVKKVETVEGSRDLKIPSGIQPGDSVKLSRLGVPNMKRPSLRGDHYFVVNVLIPKYISGTERVLVEQLASLRASSKDESVSSFDDTGIPKGKSHESIKRDPTGQASSKGIKHVSSLWRSIQNFLRGGQSEERFASISLDTSLSLWRFGHQNHSVLNSFCVGFIITWFFASLAKSKYSLFRKRTQSLINRTLGENN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3750 559 Gene3D - 227 291 - -
Dod02g3750 559 CDD DnaJ 80 133 IPR001623 -
Dod02g3750 559 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 214 294 IPR036410 -
Dod02g3750 559 Pfam DnaJ domain 80 141 IPR001623 -
Dod02g3750 559 SUPERFAMILY HSP40/DnaJ peptide-binding domain 345 426 IPR008971 GO:0006457|GO:0051082
Dod02g3750 559 SMART dnaj_3 79 136 IPR001623 -
Dod02g3750 559 SUPERFAMILY Chaperone J-domain 79 183 IPR036869 -
Dod02g3750 559 Gene3D - 197 333 - -
Dod02g3750 559 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 86 442 - -
Dod02g3750 559 ProSiteProfiles Zinc finger CR-type profile. 214 296 IPR001305 GO:0031072|GO:0051082
Dod02g3750 559 Pfam DnaJ central domain 227 291 IPR001305 GO:0031072|GO:0051082
Dod02g3750 559 Hamap Chaperone protein DnaJ [dnaJ]. 77 464 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dod02g3750 559 Gene3D - 341 449 - -
Dod02g3750 559 Gene3D DnaJ domain 77 180 IPR036869 -
Dod02g3750 559 PRINTS DnaJ domain signature 82 100 IPR001623 -
Dod02g3750 559 PRINTS DnaJ domain signature 100 115 IPR001623 -
Dod02g3750 559 PRINTS DnaJ domain signature 116 136 IPR001623 -
Dod02g3750 559 PRINTS DnaJ domain signature 136 155 IPR001623 -
Dod02g3750 559 ProSitePatterns Nt-dnaJ domain signature. 121 140 IPR018253 -
Dod02g3750 559 Pfam DnaJ C terminal domain 200 418 IPR002939 -
Dod02g3750 559 SUPERFAMILY HSP40/DnaJ peptide-binding domain 199 337 IPR008971 GO:0006457|GO:0051082
Dod02g3750 559 MobiDBLite consensus disorder prediction 443 471 - -
Dod02g3750 559 CDD DnaJ_C 199 419 - -
Dod02g3750 559 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Dod02g3750 559 PANTHER EXPRESSED PROTEIN 86 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3750 Dod-Chr2 76604620 76621446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3750 81 141 C2H2 Transcription Factor Family AT1G74250 41.791 2.86e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3750 K03686 - gmx:100782135 780.785