Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3747 ATGGAGAGGGATTTTTTTTGTTTGAGCTCCAAAAATTGTGCAGGCACTAGTGTGAAAGATGATGCTGCTAACAAACTAATAGATCCAGTAAGCGGTTCAGGAATGCAGTGGTCATTCTCAAACAAGGTCTCATCCCTTCCTCAGTTCCTGTCCTTCAAGACCGCTCCGGACGATGGTCAGAGAAAGAATATTCTTGAACCACTAGCTTCATCTGGGTATATGACAGTATCAACTTGGGGTGCTTTTGAAGCTGAACAGAAACCATTCTTGAGTGTGGTCCAGAAAAATTTGTCCATAGGCAAGCAAGCAGGAAACAATCATGGAATGGCAGTGTATCCTCTGCAATGTTCTGATGCACATTCAGTTAGCAGACAGGAAGCAAGAATATATTCAGTTTCCAACCCATCAAATGAAGTGAGTCCTGTTCTCCAATCTAACCTCGCTACAGCCAGACAAAACATGGTCACTTCAGCCATAAAACCACAACCTCTTGGTTTCAGATGCTCTGGCACACCTGTATCTGTTCTTCCATCCATAGGTTCCATTGTTGGCTCTACTGACTTAAGGAATTCTTCCAAATCCTCAGGCACACCTGCTCAGCTGACCATTTTCTATGCTGGTTCAGTATGTGTTTATGATGACATACCTCCTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGGTCTGCTCCAAGTCAGAACAAGACAGCTTCCACAACTAAATTGCAGTCAGTGATCCCTATTCCCTCCAAAGATGATGGTTTCATTATAAGCCAATTCTATCCCTCACCCTTGCCAAGCCCTCTTCCAGTGACCTCTCTTGCCGGTTCTCAGCCTGGGGGAGGATCTTCTATCAACAATGAAGTCTCAATAATTAGGCCAGTAGGACCTTCAACTACCCCTACAAACCATTTGGAGTCTCCTAATGTTGTTGGTTCTGTAGGATCTGCAGCTACAAAAATGGGTAAAACAGTAGGCTTGCCTCAGGCACGTAAAGCATCCTTGGCTCGGTTTTTGGAGAAGCGAAAGGAAAGGGTCATGAACACATCTCCATACAATGTGATCAAAGAAATCACCTTAATGCAGCACTCCTGGATCAGATGGTGTTAG 1116 0.4453 MERDFFCLSSKNCAGTSVKDDAANKLIDPVSGSGMQWSFSNKVSSLPQFLSFKTAPDDGQRKNILEPLASSGYMTVSTWGAFEAEQKPFLSVVQKNLSIGKQAGNNHGMAVYPLQCSDAHSVSRQEARIYSVSNPSNEVSPVLQSNLATARQNMVTSAIKPQPLGFRCSGTPVSVLPSIGSIVGSTDLRNSSKSSGTPAQLTIFYAGSVCVYDDIPPEKAQAIMLLAGNGSAPSQNKTASTTKLQSVIPIPSKDDGFIISQFYPSPLPSPLPVTSLAGSQPGGGSSINNEVSIIRPVGPSTTPTNHLESPNVVGSVGSAATKMGKTVGLPQARKASLARFLEKRKERVMNTSPYNVIKEITLMQHSWIRWC* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3747 371 ProSiteProfiles Tify domain profile. 194 229 IPR010399 -
Dod02g3747 371 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 263 358 - -
Dod02g3747 371 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 263 358 IPR040390 -
Dod02g3747 371 Pfam tify domain 197 228 IPR010399 -
Dod02g3747 371 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 35 265 - -
Dod02g3747 371 Pfam Jas motif 330 354 IPR018467 -
Dod02g3747 371 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 265 IPR040390 -
Dod02g3747 371 SMART tify_2 194 229 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3747 Dod-Chr2 76358747 76367393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3747 35 359 Tify Gene Family AT3G17860 39.577 1.02e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod02g3747 tify 5.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3747 K13464 - gmx:100807288 453.366