Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3746 ATGGCAAGGCCAAATAGGAAACTCGCAGACAAGAACTTACAGAGTTTATTGGACTTGGACCAACCAGGAATAGCTAAACAAGTGAATCAACTGAGACCCCAGAAGTCCATTCCTGGATCAGGCCTAGAATTCAGTAACCTCTCCTATAGTGTCATAAAGAAGCAGAAAAAGGATGGAGTTTGGGTCAAGAAGGAAGCATATCTCCTTCATGACATCGCTGGCCAGGCAAAGAAAGGTGAAATTATGGCAATCTTGGGGCCAAGTGGTGCTGGCAAATCCACCTTTCTTGATGCCTTGGCAGGAAGGATTGCACAAGGGAGTTTAGAAGGATCAGTTAGAATTGATGGAAAAGCAGTAACAACTAGTTACATGAAGATGGTATCATCATATGTGATGCAAGATGACCAACTGTTCCCCATGTTGACGGTCTTTGAGACACTCATGTTTGCAGCTGAGGTTAGGCTTCCTCCTTCCCTTTCCAGGGAGGAAAAGAGGAAGAGGGTTTATGAGCTCCTTGATCAACTAGGCTTGCAGAGTGCTACGCATACATACATTGGTGATGAGGGAAGGAGGGGAGTGTCAGGAGGGGAAAGAAGAAGGGTGTCTATTGGCATAGACATCATCCATAAGCCATCACTTCTGTTTCTTGATGAGCCAACCTCAGGCCTTGATTCTACAAGTGCCTACAGTGTAGTGGAAAAGGTTAAAGACATAGCAAGAGGAGGTAGCATCGTCCTTATGACCATACATCAGCCTTCATTTAGAATTCAAATGCTTCTGGACCGGATCACCGTCCTTGCAAGGGGAAGACTCATATACATGGGAAGGCCAGGTGCACTTCCTGCATACCTTTCCGGATTTGGAAGGACTTTACCAGATGGAGAAAACAGCATTGAGTACCTCCTTGATGTTATAAAAGAATATGATCAATCAACAATTGGACTTGACCCTCTTGTTCTATACCAACGTGATGGCCTCAAACCTGATCAAGTAGCCAAGACACCTGTCCCAAGAACACCTTACAGAAGGAACACCTCTGCTGCTTCCAAACATATGATTAGCCTAAAGAGCCAAGGTTTTGCAGCTGGAACATCAGTTCCTGACTCCTCACACTTTGGCTATGATTATGAAGATGATGATAATGATGATGAGAATTTTGACAACTCCCTTGGGAGGAGAAGTGCTCAAACACCAAGGACTATGATCAGTGGTGTCCACCCGCGTTTGGCTTCTCAGTTTTACAAAGATTTCTCAGCCAAGGATTTCTCTGTCTGGCTTTACCATGGTGTGGTAGGAACACCTCACCGCCCTCCATCATGGACACCAGCAAGGACACCAGGATTGACACCTGGGAAGACACCAATGTCAGGAATAAGAAGTGCCATTTCTAGCCAACACTATCCATCATATCAAGATCCTTATCGCCACAAAACACCTGCAATAGTTAGCCAGTCCATTGACACATATGCAACATCATATGAAGAGTTTGAGATTGAAGAAGTGCTTGATGTTGAGGCAAGCCTTGGACCAAAGTATGCAAACCCATGGCTGCGTGAGGTTGCTGTGCTTTCTTGGAGAACAGCACTCAATGTGATCCGCACCCCAGAACTCTTCCTCTCTAGGGAGATTGTCCTAACTGTTATGGCACTTGTCCTATCCACCATCTTCAAGGATATAAGCCACCTCACTTGCAAAGACATCAATAAGCTCCTCAACTTCTACATCTTTGCAGTGTGCTTAGTCTTCTTTTCTTCCAATGATGCAGTCCCATCCTTCATCTTGGAGAGGTTCATCTTCATAAGGGAAACTTCCCACAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTACCATTTTTCACTGTCCAAGGCCTCACTTTTGCTGCCATAACAAAACTAATGCTCCACCTTAAAAGCAGCCTCTTGTACTTCTGGCTAATCCTTTTTGCCTCACTTATCACCACCAATGCATATGTGATGCTTGTGAGTGCCCTTGTGCCAAGTTACATCACAGGATATGCAGTGGTCATAGCCACAACAGCACTCTTCTTTCTGACCTGTGGTTTCTTCCTCAAGAGAACTCAGATACCCTTTTACTGGAAGTGGCTCCACTACATTTCTGCTATCAAGTACCCTTTTGAGGCATTGCTGACAAATGAATTCAACAATGAGAAATGCTACAAAGGAAACATAGCAGATTTGTCCCCTGGTCCATTGGGAGAGGTGAAGTTCAGCAGCCACCATAACTCTTCCAGTGATTGCATATTGATAGGAAAAGATGTCTTGCAAACAATGGATATTCAAATGGAGAACATATGGTATGACATCTTGATCCTGCTAGCTTGGGGTGTTCTCTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAGAGAAAATAA 2427 0.4417 MARPNRKLADKNLQSLLDLDQPGIAKQVNQLRPQKSIPGSGLEFSNLSYSVIKKQKKDGVWVKKEAYLLHDIAGQAKKGEIMAILGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKAVTTSYMKMVSSYVMQDDQLFPMLTVFETLMFAAEVRLPPSLSREEKRKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDRITVLARGRLIYMGRPGALPAYLSGFGRTLPDGENSIEYLLDVIKEYDQSTIGLDPLVLYQRDGLKPDQVAKTPVPRTPYRRNTSAASKHMISLKSQGFAAGTSVPDSSHFGYDYEDDDNDDENFDNSLGRRSAQTPRTMISGVHPRLASQFYKDFSAKDFSVWLYHGVVGTPHRPPSWTPARTPGLTPGKTPMSGIRSAISSQHYPSYQDPYRHKTPAIVSQSIDTYATSYEEFEIEEVLDVEASLGPKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKDISHLTCKDINKLLNFYIFAVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFTVQGLTFAAITKLMLHLKSSLLYFWLILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPFYWKWLHYISAIKYPFEALLTNEFNNEKCYKGNIADLSPGPLGEVKFSSHHNSSSDCILIGKDVLQTMDIQMENIWYDILILLAWGVLYRFFFYLVLRFYSKNERK* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3746 808 Pfam ABC-2 type transporter 520 726 IPR013525 GO:0016020|GO:0140359
Dod02g3746 808 SMART AAA_5 78 278 IPR003593 -
Dod02g3746 808 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Dod02g3746 808 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Dod02g3746 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 283 IPR027417 -
Dod02g3746 808 Gene3D - 41 284 IPR027417 -
Dod02g3746 808 CDD ABCG_EPDR 39 275 - -
Dod02g3746 808 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Dod02g3746 808 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 802 - -
Dod02g3746 808 PANTHER ABC TRANSPORTER 4 802 - -
Dod02g3746 808 MobiDBLite consensus disorder prediction 371 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3746 Dod-Chr2 76353342 76357253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3746 40 275 Calmodulin-binding Proteins AT2G36910 23.868 3.17e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3746 K05681 - gmx:100819497 1283.86