Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3720 ATGGCGACGAATTCATCCCTCCTACCGCCGCAGAGCTCGATCTTGCCGCCGCCTGCCGACGACGAGGCTCAGACTACGACTGATTCCGACTCTCGTGACCCGCTCTTGGACGCCAACCACACCATTGTACCTTTCACCGCCGCCGACGAAGACTCTGACGGCGAAGATGACCTAAAGTATCTTCAAAGAGTGCAGAGCCTTTACAAGCCATTGTCTAATATCCCTCAGCCGCCGCCGCCTCCGCGGCCGACGATGGGGACGGTGACTGCCTCAGATGACGACGACGAGGACGATGTCGAGACGCTCAAAGCCATTCTCAAGCGGCTTTCCAGTTACGATAAAGATTCTCATGAAGGCAGTTTGGGTACAATGGCTGAGGGAAATCATGCCTCAAGTCTAGGGTCCAAGATTGCTAATGATTCAAAGTCTTGCAGATTGGATGGTGGTGAATTGTGTCATGTTTCTAAAGATCCTAATAATACCACCAATTTGTTGACCGGGAACATTGAAATGCAGCATCATGGTTTTGATGAAAGTTATAAGCCAGATGCGTGCAATATATCCAAATTACCGCAGAAGAGATCTGATTTTCCACCGGCAGCTCAGGCTCTTGTTGACGCCATCAAGAAGAATAGGTCTCTTCAGAGATTTCTTAGAAGCAAGTTGATTGAGATGGAAGCAAAAATTGAGGAAAACAAACAGCTAAGGGATAAAGTTAAACTCCTTAAGGACTTCCAGCATTCATGCATTAGAAGAACAGGGAGCGCTTTATCGCTGAAAAAGGATCCCCGTGTTCAATTAATATCCGCAAAGAAGAGCCAAAATAAAAAAACATCTGCAATGTGTTATGGTCCAGATGAGAATTCTCATGTCGTCAATTATAAGATGGTTTTGGAAAGATTTCCGCTCTCCTTGGATCGAAAAAAATGGTCGAATGAGGAAAGGGAAAATCTTACAAAGGGAATTAAGCAACAATTCCAAGAAATGGTGCTTCAAATTTCAGTAGATAGAATAAGTTCAGAATGCTCATTTGGGGATGCGAATGACATGGATAGCATAATTGCATCTATTAACAATCTTGAAATTACACCCGAGAGGATTAGAGAATTTTTACCCAAAGTTAATTGGGATCGGTTGGCTTCCATGTATGTTCCTGGCCGTACAGGTGCTGAATGTGAATCAAGGTGGTTGAATTGTGAAGATCCCTTGATCTACCAAGGCCCATGGAGTGGTGAAGAGGATAGGTCTCTTTTGCTCATTGTCCAAGATTTGGGTATTAGGAACTGGTTTAATATTGCTGTTTCATTGGGCACAAACAGGACTCCATTTCAGTGCTTGGCTCGATTCCAAAGGAGCTTAAATCCTTCTATGCTGAATAGGGAATGGACTGAGGAAGAAGATGCTCAACTTTGTTATGCCGTAGCTCTTTTCGGTGAAAGCAACTGGCAATCTGTTGCTTCTGTTTTAGATCGGCGGACAGGAAGCCAGTGCTCAAATAGATGGAAAAAATCAATTTGCCCTGGGAGAAAAGGGAGCTTTACTCCAGAGGAAGATAAGCGCTTAACAGTAGCAGTCATGCTTTTTGGACGGAAATGGAATCAAATAGCTAAATATGTTCCTGGTCGGATCCAATCTCAGTGTAGGGACAGATACCTCAATAGTTTGGATCCTTCTTTAAAATGGGGTGGATGGACTGAGGAAGAGGATTCAAGATTAGAAGCTGCAATTGCCAAGCATGGATTCTGCTGGTCTAAGGTTGCTGAAGACATGCCTCCTCGTACTGATTCCCAATGCCGGAAGAGATGGAAGGTGTTATTCCCTGATCAAGTTCGCTTGCTTCAAGAAGCAAGAAAGAAGCAAAAATCTTTACTTGCTGGTAACTTTGTTGATCGAGAATCTGAACGCCCAGCCCTTACACTGAATGACTTCTTTCCTTTACCTACATTAGGTCCACCTTCTGAAGGTGGTGATGTGAATCAACCTGGGAAGCGGAAGAGAAAGACAAGCAATGCTCCCATGAAAACAAAGTCTAAAGGATGCTCAAAGAAACCTCGAATTCATCTCAAGGATGAACATGATAAGGTGTATAGTGATGAGGCCAAGCCCAATGGTGGGTATGTTCCATTCATTGCATGGAGCAATGTTCCAAAGAGAATGAGGTCCAAAAGACAATTAAGAAAGGCTCCAATTCGTCTCAAGGAAGTTGGAAGCAGTTTTTCCAGAACTTGCTCAAAGAAGGAAAGCAACAATAGGGGGAAACCAAGCAAAAATATTGGAGGTGTTGAACCATCAGAGAACAAACCAAGTACTAAAATGTCAAAACCTGGAAGCCAGTCTACTTGCGTTGAGAGTTTAGAAAGTCAAGATGGGGACAACGTAACTCTTGCTTCCTTTGTTCATTTGTCAAGGAAGAGAGGGTTGAAATGCAGCAAAAATGCTAGCCAGACTTCCTTTCAATCTATGACAATAGTTGTATCTAAGCAGGTTGATAATCATAACCCATCTGGTGACCAAGATGAGTTGTCTCAGTTATGTATTACTGATGGAACAGAAGATTTGGTCATGGACCAAAATGCTGCTTCTCATGGACAAGTGATAAAACCAGAGAACCTAACTTCGTTGTCCGGTGGTGATGATGTCGATAACAAGACGACGCTTGCTTGCCTTATGGGAAACAAATCAAAAAAATGGAGTAAAGCTGCTACCAAATTGAAAAAAGTACCTATTCTACGTCCTGAAGTGCATTCTACAAACAAGCCAACCATCATAGCTGATGGTGATGGACTGTCAATGTCAAAGCTCGTTGAAGAGCGATCTGGTTCTTATGGTGGTGCAGCTGAAGACTTCGACTCCAACATGGATGAAGAAAATGAACTGCTTGCTTCATTCCTGAGAAGAAAGGCCAAGAGACAGGGAAGAGAACAAAAATCTCATAAAGGTAATCGTTAA 2949 0.4334 MATNSSLLPPQSSILPPPADDEAQTTTDSDSRDPLLDANHTIVPFTAADEDSDGEDDLKYLQRVQSLYKPLSNIPQPPPPPRPTMGTVTASDDDDEDDVETLKAILKRLSSYDKDSHEGSLGTMAEGNHASSLGSKIANDSKSCRLDGGELCHVSKDPNNTTNLLTGNIEMQHHGFDESYKPDACNISKLPQKRSDFPPAAQALVDAIKKNRSLQRFLRSKLIEMEAKIEENKQLRDKVKLLKDFQHSCIRRTGSALSLKKDPRVQLISAKKSQNKKTSAMCYGPDENSHVVNYKMVLERFPLSLDRKKWSNEERENLTKGIKQQFQEMVLQISVDRISSECSFGDANDMDSIIASINNLEITPERIREFLPKVNWDRLASMYVPGRTGAECESRWLNCEDPLIYQGPWSGEEDRSLLLIVQDLGIRNWFNIAVSLGTNRTPFQCLARFQRSLNPSMLNREWTEEEDAQLCYAVALFGESNWQSVASVLDRRTGSQCSNRWKKSICPGRKGSFTPEEDKRLTVAVMLFGRKWNQIAKYVPGRIQSQCRDRYLNSLDPSLKWGGWTEEEDSRLEAAIAKHGFCWSKVAEDMPPRTDSQCRKRWKVLFPDQVRLLQEARKKQKSLLAGNFVDRESERPALTLNDFFPLPTLGPPSEGGDVNQPGKRKRKTSNAPMKTKSKGCSKKPRIHLKDEHDKVYSDEAKPNGGYVPFIAWSNVPKRMRSKRQLRKAPIRLKEVGSSFSRTCSKKESNNRGKPSKNIGGVEPSENKPSTKMSKPGSQSTCVESLESQDGDNVTLASFVHLSRKRGLKCSKNASQTSFQSMTIVVSKQVDNHNPSGDQDELSQLCITDGTEDLVMDQNAASHGQVIKPENLTSLSGGDDVDNKTTLACLMGNKSKKWSKAATKLKKVPILRPEVHSTNKPTIIADGDGLSMSKLVEERSGSYGGAAEDFDSNMDEENELLASFLRRKAKRQGREQKSHKGNR* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3720 982 SUPERFAMILY Homeodomain-like 382 450 IPR009057 -
Dod02g3720 982 Coils Coil 218 238 - -
Dod02g3720 982 MobiDBLite consensus disorder prediction 1 57 - -
Dod02g3720 982 MobiDBLite consensus disorder prediction 667 683 - -
Dod02g3720 982 CDD SANT 512 555 IPR001005 -
Dod02g3720 982 SUPERFAMILY Homeodomain-like 535 610 IPR009057 -
Dod02g3720 982 ProSiteProfiles Myb-like domain profile. 556 606 IPR001005 -
Dod02g3720 982 MobiDBLite consensus disorder prediction 718 786 - -
Dod02g3720 982 ProSiteProfiles Myb-like domain profile. 401 453 IPR001005 -
Dod02g3720 982 Gene3D - 453 504 - -
Dod02g3720 982 Gene3D - 403 452 - -
Dod02g3720 982 MobiDBLite consensus disorder prediction 70 96 - -
Dod02g3720 982 Gene3D - 306 402 - -
Dod02g3720 982 CDD SANT 564 606 IPR001005 -
Dod02g3720 982 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 556 610 IPR017930 -
Dod02g3720 982 ProSiteProfiles Myb-like domain profile. 454 505 IPR001005 -
Dod02g3720 982 MobiDBLite consensus disorder prediction 18 32 - -
Dod02g3720 982 CDD SANT 461 503 IPR001005 -
Dod02g3720 982 SMART sant 458 507 IPR001005 -
Dod02g3720 982 SMART sant 405 455 IPR001005 -
Dod02g3720 982 SMART sant 509 557 IPR001005 -
Dod02g3720 982 SMART sant 560 608 IPR001005 -
Dod02g3720 982 SMART sant 306 402 IPR001005 -
Dod02g3720 982 MobiDBLite consensus disorder prediction 644 700 - -
Dod02g3720 982 Pfam Myb-like DNA-binding domain 510 553 IPR001005 -
Dod02g3720 982 Pfam Myb-like DNA-binding domain 307 398 IPR001005 -
Dod02g3720 982 Pfam Myb-like DNA-binding domain 563 605 IPR001005 -
Dod02g3720 982 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 454 509 IPR017930 -
Dod02g3720 982 Pfam Myb-like DNA-binding domain 409 470 - -
Dod02g3720 982 ProSiteProfiles Myb-like domain profile. 302 398 IPR001005 -
Dod02g3720 982 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 50 798 - -
Dod02g3720 982 CDD SANT 408 453 IPR001005 -
Dod02g3720 982 SUPERFAMILY Homeodomain-like 456 551 IPR009057 -
Dod02g3720 982 Gene3D - 560 608 - -
Dod02g3720 982 Gene3D - 508 559 - -
Dod02g3720 982 ProSiteProfiles Myb-like domain profile. 509 555 IPR001005 -
Dod02g3720 982 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 510 555 IPR017930 -
Dod02g3720 982 MobiDBLite consensus disorder prediction 762 786 - -
Dod02g3720 982 MobiDBLite consensus disorder prediction 684 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3720 Dod-Chr2 75951434 75959289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3720 174 649 MYB-Related Transcription Factor Family AT3G18100 53.629 1.55e-180 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod02g3720 Myb_DNA-binding 5.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3720 K09422 - gmx:100818474 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3720 02 75951434 75959289 Dod02g3720 02 75951434 75959289 ECH