Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g3715 | ATGCCACCAAGAAATGGAGAGGTTCTGCAGCTTATCCAAACCCAGGTTTTACATGCCAAGACTTGGGCTGAGAGCTCTGTGAGATTGCAGGGCCTTGCAGACCAAACGAATGTGGCTCTGAGAGATTGTGCCAAGCTCTATGGGGATTGCGAGTCTAGGCTTTCCTTCATGATATCCGACAAGAGCGCTTATTATAGCAACCAAGGCATGCTTACATGGGTTAGTGCTGTGATGACAAACCACAAGACTTGCTTGGATGGTTTGCAAGAAATGGGATATCTTGGAGCTCGGCCTTTGGGGAAAAACCTGAGCATGTTGCTTGGGGAAGCTCTTCTTTTGTATGCAAAGAACAAAGGCAGAGCCAAAGGACAACCTTAA | 378 | 0.4735 | MPPRNGEVLQLIQTQVLHAKTWAESSVRLQGLADQTNVALRDCAKLYGDCESRLSFMISDKSAYYSNQGMLTWVSAVMTNHKTCLDGLQEMGYLGARPLGKNLSMLLGEALLLYAKNKGRAKGQP* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g3715 | 125 | Pfam | Plant invertase/pectin methylesterase inhibitor | 34 | 96 | IPR006501 | GO:0004857 | |
| Dod02g3715 | 125 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED | 6 | 120 | - | - | |
| Dod02g3715 | 125 | CDD | PMEI-like_4 | 8 | 117 | - | - | |
| Dod02g3715 | 125 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 8 | 115 | IPR035513 | - | |
| Dod02g3715 | 125 | PANTHER | PECTINESTERASE | 6 | 120 | - | - | |
| Dod02g3715 | 125 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 9 | 94 | IPR035513 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dod02g3715 | 7 | 122 | Carbohydrate Esterase | AT3G60730 | 34.711 | 1.91e-15 | 69.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g3715 | K01051 | - | gmx:100792852 | 125.561 |