Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3714 ATGGAGCACATCAAGTTCAAAGGCAGACTTCACAGTGGCACAAGATGGTTCAAGTATATACCCACAAGACAATCAAAGAAGCATGCAGTAGATGCACTGGCAGCAATGGATCATAACCGTCCTGAAAGAGCGGTTATTATCTATGTAAAATCTGCAGTCTACAACGAGATCGTGGAGGTAGGATACAAGCTGAAGAATGTGATGTTTGTTGGAGATGGCATAGACAGCACAATTGTCACTGGAAACAGAAATGTCGTTGACGGTTACACAACTCTTTGCTCAGCTACATTTGATGTATCAGGGGATGGATTTTGGGCAAGGGATATGACATTTGAGAACACAGCAGGCCCTGAGAAGCACCAAGCAGTGGCACCAAAAGTCAGCTCAGATCTATCCCTCTTCTACAGATGCAGCTTCAAGGCATACCAAGACACTCTCTTTGCAAGGAGACCAGTGGATTCCAACTACAGGGGTGCCATTTTGGTCTTCAATTTAATGTATAAGGGAGATTAA 513 0.4405 MEHIKFKGRLHSGTRWFKYIPTRQSKKHAVDALAAMDHNRPERAVIIYVKSAVYNEIVEVGYKLKNVMFVGDGIDSTIVTGNRNVVDGYTTLCSATFDVSGDGFWARDMTFENTAGPEKHQAVAPKVSSDLSLFYRCSFKAYQDTLFARRPVDSNYRGAILVFNLMYKGD* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3714 170 Gene3D - 24 164 IPR012334 -
Dod02g3714 170 Pfam Pectinesterase 29 149 IPR000070 GO:0030599|GO:0042545
Dod02g3714 170 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 24 149 - -
Dod02g3714 170 SUPERFAMILY Pectin lyase-like 29 157 IPR011050 -
Dod02g3714 170 PANTHER PECTINESTERASE 24 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3714 Dod-Chr2 75882836 75884304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3714 22 147 Carbohydrate Esterase AT3G60730 66.667 1.02e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3714 K01051 - gmx:100792852 192.971