Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3685 ATGGCTGAACACGTGAAATGGAGAAGACCAAGAAACCAGTTGAGCCACCCCATCTCAGTAACTGATCCAACCCCACAAATCCCTTCCATAATCCAATCCACAAGGTGCAAATCCACCTTATCCTCTCTCCTCCTCTCCACTTTCTCGAACAACACCACCACCTCCAATGAAACCACACATTCCAGTGTCCACAGCAGAAAGAACAAGAACAACAACAACAACAACAATGGCAACAGTAACTTTTCTTCAGCTACCTTCAGAGGGCTTGGTTGCACTGCTGGTGCATCAGGGCAAGTGTCAGTTCCAGCTATGATTCGATCCTCCGCGGATTGGCAAGGGAACAACAACAGCAGGAAAAATAAGAAGAAGAAGCATAGAAGAAGGAGCAGTGAAAAAGGCAGCAAGACTTTTCATAATGGGGTGGTTGTTGTTGATGGTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTGCTACATGTCTGGATTTTCAGGATGTTTGGTGTGGCCCTGGAATTGGGTTCTCAGCTGATGCTGCTGCTACTGCTTCGGCTTCTGTGGACTGTGTTGTTGCAAGGAAGAATGTGTCTTCAAGAGGAAGACTTGATGTTGTGGAGAGGGTGACACACAGGGAGCGTCCACCGCCTTATTTGGGAAGGCGCACTTTAAACACAGGCTTCTCTTTTTTGGATGATGATCCAGACATTTTCGCAGCACACCCTGGCTCAGAGTCTTTTGCCGCCGGTAGATACTATCGCCACATTCCACATCCTTCCTCTGATGGCCTTGCTGAGATGATGGTATTTCAAGAAAGACTATTAATGGGGGGAAGATTAAATTCACACGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATACGAGCAATTGCTTGAGCTGGGTGAGAGAATTGGCTATGTGAACACCGGACTCAAAGAAGATGAGATGGGGCACAACATAAGGAAAATTAAGCATGTAATTTCAAATGATACATCAAAGCATCAACTAGACAAAAAGTGCAGCATTTGTCAGGAGGAGTATGAAGCTGATGATGAGCTTGGGAGGCTAAACTGTGAACACAACTATCACTTTCAGTGTATACAACAATGGCTTGTGCATAAAAACTTCTGTCCAGTCTGTAAGCAAGAAGTTGTGGTTCGACACTGA 1170 0.4504 MAEHVKWRRPRNQLSHPISVTDPTPQIPSIIQSTRCKSTLSSLLLSTFSNNTTTSNETTHSSVHSRKNKNNNNNNNGNSNFSSATFRGLGCTAGASGQVSVPAMIRSSADWQGNNNSRKNKKKKHRRRSSEKGSKTFHNGVVVVDGSSSSSSSSSSATCLDFQDVWCGPGIGFSADAAATASASVDCVVARKNVSSRGRLDVVERVTHRERPPPYLGRRTLNTGFSFLDDDPDIFAAHPGSESFAAGRYYRHIPHPSSDGLAEMMVFQERLLMGGRLNSHDQFRDWRLDVDNMSYEQLLELGERIGYVNTGLKEDEMGHNIRKIKHVISNDTSKHQLDKKCSICQEEYEADDELGRLNCEHNYHFQCIQQWLVHKNFCPVCKQEVVVRH* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3685 389 MobiDBLite consensus disorder prediction 106 155 - -
Dod02g3685 389 MobiDBLite consensus disorder prediction 141 155 - -
Dod02g3685 389 ProSiteProfiles Zinc finger RING-type profile. 341 382 IPR001841 -
Dod02g3685 389 MobiDBLite consensus disorder prediction 118 132 - -
Dod02g3685 389 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 2 389 - -
Dod02g3685 389 SMART ring_2 341 381 IPR001841 -
Dod02g3685 389 MobiDBLite consensus disorder prediction 1 27 - -
Dod02g3685 389 MobiDBLite consensus disorder prediction 49 81 - -
Dod02g3685 389 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 389 IPR045191 GO:0061630
Dod02g3685 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 317 388 IPR013083 -
Dod02g3685 389 SUPERFAMILY RING/U-box 340 387 - -
Dod02g3685 389 Pfam Ring finger domain 340 382 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3685 Dod-Chr2 75499714 75503207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3685 1 296 C3H Transcription Factor Family AT1G73760 40.132 3.85e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3685 - - gmx:100818517 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3685 02 75499714 75503207 Dod02g3685 02 75499714 75503207 ECH