Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3667 ATGTTCAAACTTGCATGCTTCCTGTCAGTTCTGTTTCCCCTGTTCCTCATCTCCTCAGGCAGCAACAACATTTCATCCTCAAACATAACAGGTTGTCCCACAAAAAGATGCCCCAATGGACCTAACATCAGCTACCCTTTCTGGCTCTCACAAGGCTCCCTTCCTGACCAATATTGCGGTTACCAAGGATTTGGCCTAATGTGCTTAGATGATGGAAGCACCATTTTCTCTCCACCACCCGGGCTATACTACTATGTGAAGGACATAGACTATGATAGCCATAGTCTTAAGCTTGTTGATTTTGATACAGCGAACACAACTTGTCCAAGGGCACTTCACAGGTTTCCACTAAACAACCTACCTCTTTCTCATTCCCCATTGAACCTGAACCTTAGCTTCTACTACAACTGTAGCTCATACCCTTCTCACGAAGCTGATATCAGTTGTTTGAGGCATGCAGGAAACGAGTCCTTTGTGTTTTTCAATGGGAATGAAACCAAAGACTTTGACTGGTCTGAGAGATGTGAGACTAATGTTGTGGTGGCAGTGATGAAGGATCAGATTACAAGTGATGGCTTGATGGATGAGTTTCCTAGGGCCATAAGGGAAGGGTTTGTTCTTGAATGGCAAACAGACGCGAGTTGCAAAGAGTGCGAGGCTTCTGATGGATATTGTGGCTATAGTAGTACCAGAAAGGAGTTGCTGTGCTTCTGCAAGGACGGTAGTGTAAGGAGCAACACCTGTGAAGTGCCAGGGGGAACCAGGAACGGGTTGTCAAAACAAATTATAGGTTTAATAGCTGGAGGAATTGGACTGCTGCTGATGATATGCATCATACTATGCCTTTTTAGAAGACGCATATTATCACCAATTGTGCCAGAATCTTGGAAGACCAGAAAGAATGATCAAGATATTGAGGCCTTCATCAGAAATAATGGACTCCTAGCCATCGAAAGATATACTTATTCAGATATCAAGAAGATGACCAATTCTTTCGAATTCAAAGTTGGAGAAGGTGGTTATGGACAAGTATATAAAGGAATTTTAAGCAATGGTGGTCCTGTGGCCGTGAAGCTGTTGAATGCTTCCAAAGGGAATGGTGAGGAATTCATCAATGAGGTATTGAGCATTAGTAAAACATCTCATGTAAATATTGTTACATTACTTGGATTTTGTCTTGAAGGCCACAAGAAAGCTCTTATCTATGAATTTATGCCCAATGGGTCACTTGAAAAGTTCATACAAAACAACGATCCCGAAACCAATCCACCTCTGAGTTGGGAAAAGCTACACCGTATTGCAGAAGGTATAGCAAAAGGGCTAGAGTACTTGCACCGGGGTTGCAACACAAGGATTTTGCATTTTGACATAAAGCCAAACAACATACTTTTGGACAAGAACTTCTGCCCCAAAATCTCAGATTTTGGGCTGGCTAAGCTATGTTCAAAAACACAGAGTGTCATCTCAATGTTGGGTGCAAGAGGAACAATTGGTTACATAGCTCCAGAGGTGTGGAACAGAAACTTCGGAGGGGTCTCACACAAATCTGATGTATATAGTTATGGAATGATGATTTTGGAAATGGTGGGAGGAAAGCATAAGACAAATACTGGAGTAACAGATGCTAGTGAGTTATATTTTCCTTATTGGATATACAAGCAGATTGAGGGGGACAATAGTGTAGCATGGCAAGGTGCCATGACCACAGAGGAAAATGAGATAGTGAAGAAGATGATTATGGTAGGGCTGTGGTGCATACAGACATTGCCATCAGACAGGCCTCCAATGAGTAGGGTGATTGAAATGCTAGAAGGAAGTATAGACCAGTTGCAATGTCCCCCGAAGCCTTTCATTTTTTCTCCAACTATAACCAGAGTGGAATCTTGTGCAACTTGTTCCATTGACCAAATTTCCAGTAGATCATAG 1926 0.4237 MFKLACFLSVLFPLFLISSGSNNISSSNITGCPTKRCPNGPNISYPFWLSQGSLPDQYCGYQGFGLMCLDDGSTIFSPPPGLYYYVKDIDYDSHSLKLVDFDTANTTCPRALHRFPLNNLPLSHSPLNLNLSFYYNCSSYPSHEADISCLRHAGNESFVFFNGNETKDFDWSERCETNVVVAVMKDQITSDGLMDEFPRAIREGFVLEWQTDASCKECEASDGYCGYSSTRKELLCFCKDGSVRSNTCEVPGGTRNGLSKQIIGLIAGGIGLLLMICIILCLFRRRILSPIVPESWKTRKNDQDIEAFIRNNGLLAIERYTYSDIKKMTNSFEFKVGEGGYGQVYKGILSNGGPVAVKLLNASKGNGEEFINEVLSISKTSHVNIVTLLGFCLEGHKKALIYEFMPNGSLEKFIQNNDPETNPPLSWEKLHRIAEGIAKGLEYLHRGCNTRILHFDIKPNNILLDKNFCPKISDFGLAKLCSKTQSVISMLGARGTIGYIAPEVWNRNFGGVSHKSDVYSYGMMILEMVGGKHKTNTGVTDASELYFPYWIYKQIEGDNSVAWQGAMTTEENEIVKKMIMVGLWCIQTLPSDRPPMSRVIEMLEGSIDQLQCPPKPFIFSPTITRVESCATCSIDQISSRS* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3667 641 SMART serkin_6 330 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3667 641 SUPERFAMILY Protein kinase-like (PK-like) 315 604 IPR011009 -
Dod02g3667 641 ProSiteProfiles Protein kinase domain profile. 330 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod02g3667 641 Pfam Wall-associated receptor kinase C-terminal 153 241 IPR032872 -
Dod02g3667 641 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Dod02g3667 641 Gene3D Phosphorylase Kinase; domain 1 294 404 - -
Dod02g3667 641 PANTHER - 19 640 - -
Dod02g3667 641 CDD STKc_IRAK 336 605 - -
Dod02g3667 641 Pfam Protein tyrosine and serine/threonine kinase 334 603 IPR001245 GO:0004672|GO:0006468
Dod02g3667 641 Pfam Wall-associated receptor kinase galacturonan-binding 32 100 IPR025287 GO:0030247
Dod02g3667 641 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 640 IPR045874 GO:0004672
Dod02g3667 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Dod02g3667 641 Gene3D Transferase(Phosphotransferase) domain 1 405 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3667 Dod-Chr2 75023602 75027687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3667 9 618 Receptor kinase-like Gene Family AT5G38260 40.223 4.05e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Dod02g3667 PK_Tyr_Ser-Thr 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3667 - - ahf:112802243 930.243