Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3658 ATGGCGACGCCGTTAACGGGGATGCAGCACCTAGAAGGCGTGGCGGTGCTGGCTAATAATCGCGTGAGCAAGGTGGATCCTTCTTCGTCCTCCAATGGCGGCGCCTTCAACGGCTCGCAATTGGAGTCGCCAATTTTGATATTCTCGTTCTTCCACAAGGCGATTCGGAACGAGCTCGACGCCTTGCACCGGTCCGCCATGGCCTTCGCCACCGGAGACGGTGACCGCTCCGATATCCGGCCTCTATCGGAACGGTACCGTTTCATCAGATCGATGTATAGGCACCACTCCAATGCCGAAGATGAGGTGATTTTTCCAGCTTTAGATATACGTGTGAAGAATGTAGCACAGACATATTCTCTTGAACACAAGAGTGAAAGCAATCTTTTTGATCATCTATTTGAGCTGTTGAATTCTTCGATCCATAATGATGAAAGTTTCCTGCGGGAGTTAGCATCATGCACTGGAGCTCTCCAGACGTCAGTTAGTCAACACTTGGCTAAGGAAGAGGAGCAGGTTTTTCCACTGCTTATTGAGAAGTTCTCTCTTGAGGAACAAGCATCTTTAGTTTGGCAATTTCTTTGCAGTATTCCCGTGAATATGATGGCTGAATTTCTTCCCTGGCTTTCAACATCTATATCACCCGATGAATCTCAAGATTTGAGGAAGTACTTAAGCAAAATAGTGCCGGAGGAAAAACTTCTTCAAAAGGTTATTTTCACGTGGATGGAAGGGAGAAGTAGTGCTAACACAGTTGAAAATTGTGTAGATCATTCTCAGGTTCAATGTAGTCCTGGTCCATCAACCCATCAGATTGGGAAACTAAAATGTGCATGTGAGCCCACAGCAACTGGGAAAAGGAAATATTCTGGATCTATCATAGATGTTTCTGACACAATGGGAACACATCCTATAGATGAAATATTGCTATGGCATAATGCAATAAAGAAAGAATTAAATGAGATAGCAGTAGAGACCAGAAAGATACAACTCTCTGGAGATTTTACTAATCTTTCGGCTTTTAATGAAAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAGAACTTTCTTTCTTACAGGAACATGCTGAAGAAGAAAGCCAATTCAATGACTTCCGGTGTTTAATTGAGAGTATTCAAAGTGAAGGAGCAACATCTAATTCAGAAGCTGAATTTTATTCCAAGTTGTGCTCACATGCTGATCTTATAATGGAAACCATTCAGAATCATTTCCAAAGCGAAGAAGTCCAGGTTCTTCCACTTGCACGAAAACACTTTAGTTTCAAAAGGCAACGTGAACTTCTGTATCAAAGCTTGTGCATGATGCCTTTGAAATTGATTGAGCGTGTGCTGCCATGGTTGGTTGGATCATTAACTGAAGATGAAGCAAAGATGTTTCTGAAAAACATGCAATTGGCAGCTCCAGCAACAGATTCTGCTCTAGTCACACTCTTCAGTGGTTGGGCTTGCAAGGCTCGTAACTATGGTCTGTGTTTGTCTTCAAGTGCACCAGGTTGCTGTCGTGCTCAGAGACTTACTGATATCGAAGAAAATATGGTTCAATCTTCCTGTACTTGTGCTTCTGCTTTGGCTGCTAGAGATTGCTCTGTATTAGCTGATTCAGATGGGACTGAAAGATCAGTCAAGCGGAACATATTGGAGTTTCACAAGAATGGAGATGTCCCTGAAACTTCAGAAAATGGTAGTATCCAGAGAAAATGTTGTAATGTTCAGTCTTGTTGTGTGCCAGCTTTAGGAGTCAACAGTAACAATTTGGGGCTGAGTTCCCTTGCTACAGTCAAGTCATTGCGCTCCTTGTCTTTCACCTCTTCTGCCCCTTCCCTTAATTCTAGTCTTTTCATATGGGAAACAGACAGCAGCTCATGTGATGCAGGCTCTACAGAAAGACCTATTGATACCATATTTAAATTTCATAAAGCTATACGCAAGGACTTGGAGTATTTAGATGTTGAATCTGGAAAGCTTAGTGAAGGTGATGAAACTACTATTCGGCAGTTTAGTGGAAGATTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCTGCATTAGAATCCAAGGAGACACTTCACAATGTGAGCCATTCTTATATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCTTGTGCTCTTTCTGAGCTTTCAGCCCTTCATGAGGCCTTGCAGATGACCCCTATGTCAGAGGATTTGAATGAACATAATTTTGAAACTTCTGATGCAGATGATAGTGATTGTATTAGAAAGTACAATGAGCTTGCAACTAAGCTTCAAGGGATGTGTAAATCTGTAAGAGTAACCCTGGATCAGCATATTTTTAGGGAAGAACTCGAACTCTGGCCACTGTTTGGGAAACATTTCACTGTTGAAGAGCAGGACAAGATAGTGGGCCGGATCATTGGAACTACTGGTGCTGAAGTTCTCCAATCAATGTTACCTTGGGTAACTTCTGCACTTACTGAGGATGAACAGAACAAAATGATGGACACATGGAAACAAGCAGCTAAGAACACTATGTTCAATGAATGGCTAAATGAATGCTTGAAAGAGAGTCCAGTGTCTATTTCACAGGAAGAAACATCAGAGCATACCACTTCTCAAAGAGGTGCTGACCATCAAGAAAGCTTGGAACTGAATGACCAGATGTTCAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAATGAACTTGAGTCAGAGATCCGGAAGGTTTATCGTGATTCAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTAATGACAAGTCGCTGGATTGCTGCCCAGCAGAAGCTACCTAAAGATTTATCTGGGGACTCATCTAAAGATATAGAAGGTCGATCACCATCATTTCGGGACCCAGAGAAGCAAGTATTTGGTTGTGAGCATTATAAGAGAAATTGCAAGCTTCGTGCTGCTTGTTGTGGCAAGTTATTTACATGCAGATTTTGCCATGACAGCGTGAGCGATCACTCAATGGATAGAAAAGCAACATTGGAAATGATGTGTATGCTCTGCCTGAATATACAACCAGTTGGGCCTATATGCATGTCTCCTTCTTGTAATGGACTTCCCATGGCAAAGTACTATTGTAGCATATGCAGATTTTTTGACGATGAAAGGAATGTATACCATTGCCCATTTTGCAATATATGCCGTGTTGGGCAAGGGCTTGGTATTGACTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGGATAAAATCAGCATCTCACAAGTGCCTGGAGAAAGGTCTAGAAATGAACTGCCCAATCTGCTGTGACGACTTGTTCACATCAAGTGCAACAGTAAGAGCTCTACCCTGTGGGCATTACATGCATTCAGCTTGCTTTCAGGCATACACGTGTAGTCACTACACATGTCCAATCTGCAGCAAGTCATTGGGAGATATGGCAGTTTACTTTGGTATGCTTGATGCTCTATTGGCTGCTGAGGAGCTTCCTGAAGAGTACAGGGATCGTCATCAGGACATACTCTGCAATGATTGTGATCGAAAGGGCACTGCCCGCTTCCACTGGTTATATCACAAATGTGGATTCTGTGGCTCCTATAACACCCGGGTGATCAAGACTGAGGCAGCAAATTCTAGCTGCTCTTAG 3729 0.424 MATPLTGMQHLEGVAVLANNRVSKVDPSSSSNGGAFNGSQLESPILIFSFFHKAIRNELDALHRSAMAFATGDGDRSDIRPLSERYRFIRSMYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKSESNLFDHLFELLNSSIHNDESFLRELASCTGALQTSVSQHLAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAEFLPWLSTSISPDESQDLRKYLSKIVPEEKLLQKVIFTWMEGRSSANTVENCVDHSQVQCSPGPSTHQIGKLKCACEPTATGKRKYSGSIIDVSDTMGTHPIDEILLWHNAIKKELNEIAVETRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNDFRCLIESIQSEGATSNSEAEFYSKLCSHADLIMETIQNHFQSEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFLKNMQLAAPATDSALVTLFSGWACKARNYGLCLSSSAPGCCRAQRLTDIEENMVQSSCTCASALAARDCSVLADSDGTERSVKRNILEFHKNGDVPETSENGSIQRKCCNVQSCCVPALGVNSNNLGLSSLATVKSLRSLSFTSSAPSLNSSLFIWETDSSSCDAGSTERPIDTIFKFHKAIRKDLEYLDVESGKLSEGDETTIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYMLDHKQEEKLFEDISCALSELSALHEALQMTPMSEDLNEHNFETSDADDSDCIRKYNELATKLQGMCKSVRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTEDEQNKMMDTWKQAAKNTMFNEWLNECLKESPVSISQEETSEHTTSQRGADHQESLELNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKDLSGDSSKDIEGRSPSFRDPEKQVFGCEHYKRNCKLRAACCGKLFTCRFCHDSVSDHSMDRKATLEMMCMLCLNIQPVGPICMSPSCNGLPMAKYYCSICRFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRHQDILCNDCDRKGTARFHWLYHKCGFCGSYNTRVIKTEAANSSCS* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3658 1242 Pfam Zinc-ribbon 1173 1230 IPR039512 -
Dod02g3658 1242 CDD Hr-like 306 435 - -
Dod02g3658 1242 CDD Hr-like 654 814 - -
Dod02g3658 1242 Gene3D nmb1532 protein domain like 42 195 - -
Dod02g3658 1242 Gene3D nmb1532 protein domain like 306 453 - -
Dod02g3658 1242 ProSiteProfiles Zinc finger CHY-type profile. 990 1059 IPR008913 GO:0008270
Dod02g3658 1242 MobiDBLite consensus disorder prediction 972 987 - -
Dod02g3658 1242 CDD RING-H2_Pirh2 1125 1168 - -
Dod02g3658 1242 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 24 1241 - -
Dod02g3658 1242 MobiDBLite consensus disorder prediction 887 908 - -
Dod02g3658 1242 Gene3D - 1197 1238 - -
Dod02g3658 1242 SUPERFAMILY RING/U-box 1123 1178 - -
Dod02g3658 1242 Pfam CHY zinc finger 997 1072 IPR008913 GO:0008270
Dod02g3658 1242 SUPERFAMILY Zinc hairpin stack 1063 1119 IPR037275 -
Dod02g3658 1242 MobiDBLite consensus disorder prediction 968 987 - -
Dod02g3658 1242 Gene3D nmb1532 protein domain like 648 891 - -
Dod02g3658 1242 PANTHER CHY ZINC FINGER PROTEIN 24 1241 - -
Dod02g3658 1242 Pfam Ring finger domain 1125 1167 IPR001841 -
Dod02g3658 1242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1121 1170 IPR013083 -
Dod02g3658 1242 ProSiteProfiles Zinc finger CTCHY-type profile. 1062 1125 IPR017921 -
Dod02g3658 1242 SMART ring_2 1126 1167 IPR001841 -
Dod02g3658 1242 CDD Hr-like 47 175 - -
Dod02g3658 1242 ProSiteProfiles Zinc finger RING-type profile. 1126 1168 IPR001841 -
Dod02g3658 1242 SUPERFAMILY CHY zinc finger-like 990 1054 IPR037274 GO:0008270
Dod02g3658 1242 Pfam Hemerythrin HHE cation binding domain 303 437 IPR012312 -
Dod02g3658 1242 Pfam Hemerythrin HHE cation binding domain 652 815 IPR012312 -
Dod02g3658 1242 Pfam Hemerythrin HHE cation binding domain 52 177 IPR012312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3658 Dod-Chr2 74855696 74868818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3658 1 1242 C2H2 Transcription Factor Family AT3G18290 67.381 0.0 1712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3658 K16276 - gmx:100791354 2184.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3658 02 74855696 74868818 Dod02g3658 02 74855696 74868818 ECH
Dod04g3070 04 54405148 54415875 Dod02g3658 02 74855696 74868818 PCT