Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3653 ATGTACACATCAAGGAAGAAAATCCACAAAGACAAGGATGCTGAGCCAACTGAATTTGAGGAGTCTGTTGGACAGGCATTGTTTGATCTTGAAAATACCAATCAGGATCTGAAAAGTGAACTGAAGGATTTATACATAAATTCAGCTGTCCAAATTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCACGTCCCCTACAGACTAAGGAAAGGTTTCAGAAAGATTCATGTCAAGCTTGTTAGAGAGCTTGAGAAGAAATTTAGCGGGAAGGATGTAGTCTTGATTGCCACCAGGAGGATAGTGAGGCCACCAAAGAAAGGCTCTGCTGTTCAGCGTCCCCGCAGCCGTACACTTACTACTGTGCATGAGGCAATGCTGGAGGATATTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTTAGGTACAGAATTGATGGATCCAAGATTATGAAGATTTTCTTGGATCCGAAGGAGCGAAACAGCACTGAGTACAAGCTGGAGACTTTTTCTGCAGTATACAGGAAACTTTCGGGCAAAGATGTTGTGTTTGAGTACCCTACTACAGAGGCTTAG 576 0.4392 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQDLKSELKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVKLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTTVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKIFLDPKERNSTEYKLETFSAVYRKLSGKDVVFEYPTTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3653 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod02g3653 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod02g3653 191 Coils Coil 27 47 - -
Dod02g3653 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Dod02g3653 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3653 Dod-Chr2 74782983 74785944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3653 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.534 2.33e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3653 K02993 - gmx:100527642 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3653 02 74782983 74785944 Dod02g3653 02 74782983 74785944 ECH