Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3651 ATGGCTCAATTCACTCAAGATTTGCAAAGCTTTAGACCCTCTTTTCCTTTCTTAGATATTGATCCAAGCATGGAACTCATAAATCAGTTCATAGGGATCAACACACATGTCATGGAAAATTCACATGTGAACTTGATGCCTTTCTCATGTGACAGCAGCTTCTTTGGCTCTCAAGAACCTGAGTTTCCAGAAAACTTGGAAGAAAGTTTTCATAGTCTTATTGCCCACCATCATGTCAATAACAACAGTGAAGTTCCAGTTTCTTCCCTTCCTATCTTTCAAGCAGAAAATGAAATCCATGAAGGTAAAAAGAGGAAAGCAATGGATGTTCCAGCAACTAGTTCAGCAAACTCAACTCCTGCAGCTTCTGATAATGGAAGCAAGACAAAAACTGGTTCTGGAAGGGGTAAGAGAGTAAAAAGCAATGTAGCAGAAGAGGAGAAACCAAGGGAAGTGGTTCATGTCCGAGCCAGAAGAGGTCAGGCCACTGACAGTCACAGTATAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAATTAAAGTGCTTACAAAACATTGTCCCAGGATGTTACAAGACCATGGGCATGGCGGTAATGTTGGATGAAATCATAAACTATGTCCAGTCTTTGCAGCATCAAGTTGAGTTCCTTTCTTTGAAGCTTACTGCGGCAAGTACTTTTTATGACTTCAACTCAGAGACAGATGATTTAGAAACAATGCAGAGGGCAAGGGCATCCAAGGCAAAAGAGTTAGCAAAGTACGGGAAAGAAGAATATGGAGGAGGAGTTTCTTGCTTTCAACCAACTTGGTCCCTTTGA 822 0.41 MAQFTQDLQSFRPSFPFLDIDPSMELINQFIGINTHVMENSHVNLMPFSCDSSFFGSQEPEFPENLEESFHSLIAHHHVNNNSEVPVSSLPIFQAENEIHEGKKRKAMDVPATSSANSTPAASDNGSKTKTGSGRGKRVKSNVAEEEKPREVVHVRARRGQATDSHSIAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDDLETMQRARASKAKELAKYGKEEYGGGVSCFQPTWSL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3651 273 PANTHER TRANSCRIPTION FACTOR BEE 1 2 272 - -
Dod02g3651 273 Pfam Helix-loop-helix DNA-binding domain 165 212 IPR011598 GO:0046983
Dod02g3651 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 227 IPR036638 GO:0046983
Dod02g3651 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 211 IPR011598 GO:0046983
Dod02g3651 273 MobiDBLite consensus disorder prediction 102 166 - -
Dod02g3651 273 MobiDBLite consensus disorder prediction 139 166 - -
Dod02g3651 273 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 272 IPR024097 GO:0006355
Dod02g3651 273 SMART finulus 167 217 IPR011598 GO:0046983
Dod02g3651 273 Gene3D - 161 223 IPR036638 GO:0046983
Dod02g3651 273 MobiDBLite consensus disorder prediction 111 132 - -
Dod02g3651 273 CDD bHLH_AtBPE_like 151 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3651 Dod-Chr2 74754446 74756320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3651 47 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 53.306 5.18e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod02g3651 HLH 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3651 - - gmx:100806942 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3651 02 74754446 74756320 Dod02g3651 02 74754446 74756320 ECH