Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3644 ATGGAGGAAAATCTACCTCCTGGGTTCAGGTTCCATCCAACAGATGAAGAGCTCATAACATGTTACCTTACAAGGAAAGTGTCTGAAACTGGCTTCACATCCAAAGCTATAGCAGTTGTTGATCTCAACAAGTCTGAGCCTTGGGACCTCCCAGGTAAGGCCTCCATGGGGGAAAAGGAATGGTATTTCTTCAGCTTGAGAGACCGCAAGTATCCAACTGGACTTCGAACCAACCGAGCCACTGAATCAGGATACTGGAAAACAACAGGGAAAGACAAGGAAATTTTTCGTGCTGGAGTTTTGGTGGGAATGAAGAAAACCCTAGTCTTCTATAAGGGTAGAGCTCCAAGGGGTGAGAAAAGCAATTGGGTAATGCACGAATATAGACTAGAAAACAAGAATCCCTTCGGATCAAAGGATGAGTGGGTGGTTTGCAGGGTTTTCCAAAAGAGCTCAGCAGCCAAAAAACCACAGCAAACATCATCCTCCCAACCAGAATCCCCATGTGACACCACCTCAATGGTCAATGAATTTGGTGATGTTGAGCTCCCCAATCTAAATAACATTGCTAATTCGTCAAGTGCATTCCCCAACATCATTTCAGCACAAACTTACAATGGTGATCTAAGTAATAATGTCAACACAAGCATGAACTTGGCCATGAATTGGCCAGCTTCAAGCCATGTTCCCTCTCTTCCATCCATCCCATGGCCTTCTGGGTTGCTGAATCCAAACAATATTTCTGTAAATTCCTTGATTCTCAAGGCATTACAGCTTAGGAATTATCAACAAAGAGAAGCTGCAACAGACCATAATTTGGCACCATTTATGCCTCAGGGACTTTCCCAAGTTGGAACAGACCTAGGTTCAAATCTCAATGCATCTTCTTCGAAAGTTTTAGAATGTATGCCAATGCAGCAGCAGCAGCAACAACTACAGGAGCAACCATTCAATTTGGACTCCATTTGGTGA 972 0.4372 MEENLPPGFRFHPTDEELITCYLTRKVSETGFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRAGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKNPFGSKDEWVVCRVFQKSSAAKKPQQTSSSQPESPCDTTSMVNEFGDVELPNLNNIANSSSAFPNIISAQTYNGDLSNNVNTSMNLAMNWPASSHVPSLPSIPWPSGLLNPNNISVNSLILKALQLRNYQQREAATDHNLAPFMPQGLSQVGTDLGSNLNASSSKVLECMPMQQQQQQLQEQPFNLDSIW* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3644 323 ProSiteProfiles NAC domain profile. 5 150 IPR003441 GO:0003677|GO:0006355
Dod02g3644 323 MobiDBLite consensus disorder prediction 154 175 - -
Dod02g3644 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 263 - -
Dod02g3644 323 SUPERFAMILY NAC domain 3 150 IPR036093 GO:0003677|GO:0006355
Dod02g3644 323 PANTHER BNACNNG63190D PROTEIN 2 263 - -
Dod02g3644 323 MobiDBLite consensus disorder prediction 154 174 - -
Dod02g3644 323 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Dod02g3644 323 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3644 Dod-Chr2 74662434 74665418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3644 1 323 NAC Transcription Factor Family AT3G18400 58.209 1.29e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod02g3644 NAM 3.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3644 - - gmx:100787111 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3644 02 74662434 74665418 Dod02g3644 02 74662434 74665418 ECH
Dod04g3054 04 54326074 54329432 Dod02g3644 02 74662434 74665418 PCT