Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3637 ATGCCTGGCTTTCCAAGGCAAGTTGTGAGAGAAGGAATGAAATGCACAAGAGGAAAAGAGAAAATTCTAGCCAAAGAAGGAAACTTGAACACCATGAGGAGAGTTAGAATCATTTATAGTGACCCAGATGCGACAGATTATTCAAGCGAAGATGACAAGTTTTTGAGGAATGACAATCAACAACTTGGTCCTGAGCGATTTACTAAGGAAATCTTGCTTCCATGCATGTCAACCAAATCATGTGAAGAGAATTATTCAGAACAAAACCAAACCAGCAACGAAAAGATCAAACCAAGTACCTACCTTTCTTGTAGCAGTAAGAAAAGAAGATCATCAAGCAAATACAAAGGTGTTCAACGCAGGAAGTGGGGAAAGTATGTAGCAGAGATCAAAGACCCCATTAGGGGTGTCAGAGTGTGGCTTGGTACTTTCAACACCGAAGAAGAGGCTGCGGCAGCTTATGAGAAGAAAAGGATTGAAATTGAGGATTCATTGAAAGCTTTGAGCAAAAGGGTTGATGCACTGGCCTTGGAAGATAGCAAACAAGTACTGTCTTTGTCTCATCCATCCCCATCATCTGTACTTGATGATGTTGCAGCTACAAAGGCTTCTCCATCTGACAATGACAGCAATGGTTCATTTGAAGTCAAGATAAATGCGGAAACTAGTGCTGCTGAAGGAGGAGATAGTGCTTTGGAGCCTATTTATGGAGAGGAGCATTCAATTCAGCATTGGCTTGAGGAGTCAATTGTGCCATCATTGCTTGGAGATGTCTTTGATGATTTCTTGATCAATGACAATAGTGGCTGTCCTAAGTGGCATGTGGAAAATGGTCAAGGTAGCAACATTCTTCCCCCTATTGAAACTAATTTTGATGATCCAGACTTAGCTTGGATTGATGAAACTCTGAATTTGTAA 918 0.4107 MPGFPRQVVREGMKCTRGKEKILAKEGNLNTMRRVRIIYSDPDATDYSSEDDKFLRNDNQQLGPERFTKEILLPCMSTKSCEENYSEQNQTSNEKIKPSTYLSCSSKKRRSSSKYKGVQRRKWGKYVAEIKDPIRGVRVWLGTFNTEEEAAAAYEKKRIEIEDSLKALSKRVDALALEDSKQVLSLSHPSPSSVLDDVAATKASPSDNDSNGSFEVKINAETSAAEGGDSALEPIYGEEHSIQHWLEESIVPSLLGDVFDDFLINDNSGCPKWHVENGQGSNILPPIETNFDDPDLAWIDETLNL* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3637 305 CDD AP2 117 146 IPR001471 GO:0003700|GO:0006355
Dod02g3637 305 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Dod02g3637 305 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Dod02g3637 305 MobiDBLite consensus disorder prediction 86 108 - -
Dod02g3637 305 Gene3D AP2/ERF domain 113 167 IPR036955 GO:0003700|GO:0006355
Dod02g3637 305 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Dod02g3637 305 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 304 - -
Dod02g3637 305 SMART rav1_2 114 172 IPR001471 GO:0003700|GO:0006355
Dod02g3637 305 SUPERFAMILY DNA-binding domain 113 162 IPR016177 GO:0003677
Dod02g3637 305 Coils Coil 151 171 - -
Dod02g3637 305 PANTHER - 3 304 - -
Dod02g3637 305 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Dod02g3637 305 MobiDBLite consensus disorder prediction 186 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3637 Dod-Chr2 74546157 74547091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3637 32 162 AP2-EREBP Transcription Factor Family AT1G68550 40.458 1.12e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod02g3637 AP2 4.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3637 - - aip:107642108 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3637 02 74546157 74547091 Dod02g3637 02 74546157 74547091 ECH