Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3611 ATGGATGTAGAAGATAAACCCCTTTCTAAAGTTTCTGGTGTTCAAAGCCTTTCATCCAGTGTGCAAAGTACTCCAGAAAAAAATGGCCATTCAGATGATGCCTCAAGAAGTTCAGAACTCCTTCAGGAGTTCCTGAAATCTGGTTCAAAGAAGGAACTTCTGCGAACGTGTGTTGATAAGGACAGAAAGAACGGTTCTTCGAAAAATAGGATGGCTGAAACTAAGTCAACTGGTAAGATTATGAAGAAACAGGACTCAAAAAAAGTTTCTGGTCCCAGCAGTCAGCCTTCTAGGAAGCAACATCGGAAGGGCGAAAACCCCACACGATTTGTTCCTGCTCCTGACCTGCCTTCAGATTTTGGACATTCAAACTCCTGGATCTGTAAAAATTCTGCTTGTAGAGCAATTCTATCTAAAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATCTGCCACCTTTTTGACGATAACAAGGACCCTAGTCTTTGGTTGGTATGCACATCTGAATCTGCTCAAGGGGACTCCTGTGGGCTGTCTTGCCATATCGAGTGTGCCCTTCAGCATGAAAAAGTGGGAGTTGTTGATCATGGGCAACTAATGCAACTAGATGGTGGTTATTGTTGTGCATTCTGTGGTAAAGTTACTGGGATACTTGGGTGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCACGGCGTGTAGATGTACTGTGTTACCGGATATATTTGAGCTATAGGCTTCTGGATGGAACTTTGAGATTCAAAGAATTGCATGAAATGGTACAAGAGGCAAAGACTAAACTAGAAACAGAAGTTGGTCCGGTTAATGGTGTTTCTTCCAAGATGGCACGGGGTATTGTCAGCAGACTCCCTATTGCCAGTGATGTACAGAAGCTTTGCTCTCTTGCTATTGAGAAAGCTGATGAGTGGTTGGCCACAGTACCCAATGTAAATCCAGAATCTAGAGAGGGCTCACTTCCTTCTGCCTGCAAGTTTGTTTTTGAAGAGGTAACAGCTTCCTCAGTCAAGATGATTTTGATTGAAATGTCAAATGCATCTTCTGAGGGAATCAAGGGATACAAGCTCTGGTATTACAAGAGTAGGGAGGAATCACACACAAAAGAACCTGTTTGTGTATTTCCCAAAGCTCAGAGGAGGATTTTGATATCCGATCTCCAGCCGTGCACAGAATATACTTTTAGGATTATATCTTTTACTGATAAGGGTGACCTGGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATCGAGATCTTGGAAAAAATTCCCTCTTCGTCGGTTGCCATGGATCGTAAGAAGGAGAGTCTTCGAACTGAAGACAATTCATCTGGCTCCAAAATGGAACCCAATCCCTCAATGGCTGGCTCAGGATTTAAGGTTCGAGACCTTGGAAAAATTTTGCATCTTGCTTGGGCTCAAGAACAAGGTTGCTTGGAGGGGTTTTGCCGTGCTGATGTTAGAAATTGCTGTGGACCAAGAGAAATGACCACGCCTAGCAATCCAGAAGAGCAGCAACCATCTGTTTCGCGAGGCCTTGATCTAAATGTTGCTTCGGTGCCTGATTTAAATGAAGAACTTACACCTCCTTTTGAGTCTTCCAGGGATGAGGACAATGGTTGCACTTTGCAGCAGGCTGTTGAGGCAGACGACGATGCTGCTTCTCATGATCTCGACAAAAATTGCATAGCAAGATCACATGGCAGTGGTGATTCCCAAACCTGGACACACGGGCCAACTGGAGAAGTTCCAGCAGTTGATTCTCGCGTAGATGCAAGCAAGAAAAGGTTAGCAAGCACAAATGAAGAGACACATGACTGTGACAGCACTTTGATTAATGGATCTCCTTTACATATACCAGATGGTTCGTTCTCCTTGGATGAGAACTTTGAGTATTGTGTGAAGGTAATTCGTTGGCTAGAATGTCAGGGTCATATCAAACAGGAATTTAGGTTGAAGTTGCTGACTTGGTTTAGTTTGAGGTCGACGGAGCAAGAACGTAGGGTGGTTAATACTTTCATTCAAACTCTGATTGATGATCCAAGTAGTTTGGCAGGGCAACTAGTTGACTCATTCTCTGATATTATATCATGCAAGAGGCCAAGAAATGGGTTCTGTAGTAAAGCTGTGGGATCGAATTGA 2163 0.435 MDVEDKPLSKVSGVQSLSSSVQSTPEKNGHSDDASRSSELLQEFLKSGSKKELLRTCVDKDRKNGSSKNRMAETKSTGKIMKKQDSKKVSGPSSQPSRKQHRKGENPTRFVPAPDLPSDFGHSNSWICKNSACRAILSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTSESAQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCAFCGKVTGILGCWKKQLNIAKDARRVDVLCYRIYLSYRLLDGTLRFKELHEMVQEAKTKLETEVGPVNGVSSKMARGIVSRLPIASDVQKLCSLAIEKADEWLATVPNVNPESREGSLPSACKFVFEEVTASSVKMILIEMSNASSEGIKGYKLWYYKSREESHTKEPVCVFPKAQRRILISDLQPCTEYTFRIISFTDKGDLGHSEAKCFTKSIEILEKIPSSSVAMDRKKESLRTEDNSSGSKMEPNPSMAGSGFKVRDLGKILHLAWAQEQGCLEGFCRADVRNCCGPREMTTPSNPEEQQPSVSRGLDLNVASVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLDKNCIARSHGSGDSQTWTHGPTGEVPAVDSRVDASKKRLASTNEETHDCDSTLINGSPLHIPDGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISCKRPRNGFCSKAVGSN* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3611 720 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Dod02g3611 720 CDD FN3 332 411 IPR003961 GO:0005515
Dod02g3611 720 ProSiteProfiles Fibronectin type-III domain profile. 327 426 IPR003961 GO:0005515
Dod02g3611 720 MobiDBLite consensus disorder prediction 29 86 - -
Dod02g3611 720 PANTHER VIN3-LIKE PROTEIN 2-RELATED 55 716 IPR044514 GO:0010048|GO:0040029
Dod02g3611 720 MobiDBLite consensus disorder prediction 437 463 - -
Dod02g3611 720 SUPERFAMILY Fibronectin type III 336 416 IPR036116 GO:0005515
Dod02g3611 720 PANTHER VIN3-LIKE PROTEIN 1 55 716 - -
Dod02g3611 720 MobiDBLite consensus disorder prediction 11 28 - -
Dod02g3611 720 MobiDBLite consensus disorder prediction 1 114 - -
Dod02g3611 720 Gene3D Immunoglobulins 315 424 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3611 Dod-Chr2 74019449 74028387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3611 124 711 PHD Gene Family AT3G24440 49.000 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3611 - - gmx:100780157 1276.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3611 02 74019449 74028387 Dod02g3611 02 74019449 74028387 ECH
Dod04g3025 04 54052167 54059111 Dod02g3611 02 74019449 74028387 PCT