Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3607 ATGGCGAGTAGGGTGAAGGAAGACGAGAAGAACGAACGAGTAATTCGCGGTCTTCTGAAGCTTGAACCGAATCGAAGATGCATTAACTGCAACAGCTTGGGACCACAATATGTGTGCACTAATTTCTGGACGTTTGTTTGCACAAACTGCAGTGGAATACACCGGGAATTCACCCATAGAGTAAAATCAGTTTCAATGGCTAAATTTACTTCCCAAGAAGTTAGTGCACTTCAAGAGGGAGGAAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCACAACGTCATTCTTTCCCTGATAGCAGTAATGTTGACCGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTGGAGAGAAGGCTTATGACAAACCCCCGAGAGGAAAGCCAGGTGACAAAGAAGATTTCTATGAAAACAAGAGACTTGAGATGTATCAGGGAGGACCTAAAAGCCCTCCATATGAGGACACATATGAACGCCGTTTTAGTGACAGGTCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAGAAGTCCTGGTCGTCCTCCAATAATCAATGATTGGCGTCGTGAAGATCGTCGAATATCTGATGGGGATTATAAGGTAGAAAGCCAATCTCCTGAGCGATCCAAAGATCTGGGTTCTTCAAGCCCACCTGTTGTGCGGCCAGTTAGAGAGATTTTGGGAGAAAATGTAGTACCTCTTCGGATAAGTGAACCCCCCAAACCAAACACTGGAAAGGCTGCCGATGGCTCAACATTGACACAGAGGACTGCATCTTCCAGCAGCTTGGCATCCACCAATGGAAACCCAACAGATGTTAAGCTTGAGACTGCAAAGAGCCTTATTGATTTCGATGCTGATCCTGAACCTCCTGTTGCTCCAGCAATTCCTCAAACCCAACAAACTGCTGTGCCTCAACCTGTTCTGCAGCCAGCAAGTTCCAGTGCTGACAATTGGGCTTCTTTTGATGTTGCTCCAGCAGTGAAAGCAACTCCAAACCCCTTGAATGTAAATCCACTTGAATCAATGTTGTCCCAATTGTCAGTGCCAGCATCGTTACCTGCTCATGTTTCTGGAGTCCCAGGTGGTCCACATGTTGCAACAGCTCTTCCTGGGGGCAGTGTGACAACATTACCGAGGATGGGTGACTCATCTGTTTCACCTGCAGTAGCTGTTCCAGCATCAACTCTTGCTTCTGCTCCTGGAGCTGCAAATGTTAGTGGCTTCTCAGCTTTCCCACCCAGTGGTGCTGCAGGACCATCCCCTGGACTTGCAACAGTACCACCTCTTAATAATGCAGGACAGTGGGCCAGTTTGCAGAATCAGCAATTGATGTTCCCTGCTAATGTTAGTCAGTCTACTCAACAATTTGTACAACCTGTAGGTGGAGCTGCAAACAATCAGCCGTGGAATATTCGTTCTGTACCCACAGTACAAGGGCATCCTAACACATCAATGCCACATGCTTACCATCATGCTTCGAATCCCGCCAAAGAAGTTACTTCTGCTGTTATTTCACAACCTTCCACTGCCGAAGTAAAACCAAGTGGAAGAAAAGAACTTCCTGAGGATCTGTTCACTGTAAAATATCCATCCTACCCTGCTTTGGTTCCAGGTTGGCAAATGGGTCTTCCCCATGGCGTGGGTATCTATATGCAATATAATGATGTCGTGCCCATGCCAAGTTTTCCACAGCCATCAAAATCAGTAAATCCATTTGATGTTGGCCGTGAATCAGCCCCAGTTCAAGCACCAACATTTCCTTCCTTGTCATCTTTGCACGGTGCTCTGCCTAGTATACCACCAGGCACAGTGCACCCTTCAAGCTTGGGTAGTCCATCACATGCCTTGACTCCACCCCAGTCGTCACCTTATGTACCAGTCCTGCCTGCACAAGTGCAAACTCACGTATCAGCATTGGGATCAAGGGGATACATGGGACAGCAAATGCCACCAACTAGCATGCCAATGCCAAGGCCAGAAGCTGGTAGTTTTGGTACTGTGGGAGCTGTTTTCGGCTTGTCAAATCCTGATCAGCAGCTAACTGGTGGGTTGTTAAACACTCCCAATCCTAATCCATTCCCTGCCGGAGGAAACCCATTTGGATGA 2160 0.4667 MASRVKEDEKNERVIRGLLKLEPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKEIYFKEWDAQRHSFPDSSNVDRLRDFIKHVYVDRRFTGEKAYDKPPRGKPGDKEDFYENKRLEMYQGGPKSPPYEDTYERRFSDRSSPGGRSPGYDQESRQYGDYKRSPGRPPIINDWRREDRRISDGDYKVESQSPERSKDLGSSSPPVVRPVREILGENVVPLRISEPPKPNTGKAADGSTLTQRTASSSSLASTNGNPTDVKLETAKSLIDFDADPEPPVAPAIPQTQQTAVPQPVLQPASSSADNWASFDVAPAVKATPNPLNVNPLESMLSQLSVPASLPAHVSGVPGGPHVATALPGGSVTTLPRMGDSSVSPAVAVPASTLASAPGAANVSGFSAFPPSGAAGPSPGLATVPPLNNAGQWASLQNQQLMFPANVSQSTQQFVQPVGGAANNQPWNIRSVPTVQGHPNTSMPHAYHHASNPAKEVTSAVISQPSTAEVKPSGRKELPEDLFTVKYPSYPALVPGWQMGLPHGVGIYMQYNDVVPMPSFPQPSKSVNPFDVGRESAPVQAPTFPSLSSLHGALPSIPPGTVHPSSLGSPSHALTPPQSSPYVPVLPAQVQTHVSALGSRGYMGQQMPPTSMPMPRPEAGSFGTVGAVFGLSNPDQQLTGGLLNTPNPNPFPAGGNPFG* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3607 719 CDD ArfGap_AGFG 12 122 - -
Dod02g3607 719 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Dod02g3607 719 MobiDBLite consensus disorder prediction 264 289 - -
Dod02g3607 719 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Dod02g3607 719 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Dod02g3607 719 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Dod02g3607 719 MobiDBLite consensus disorder prediction 126 289 - -
Dod02g3607 719 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Dod02g3607 719 PANTHER ARF GTPASE ACTIVATOR 1 390 - -
Dod02g3607 719 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Dod02g3607 719 MobiDBLite consensus disorder prediction 126 147 - -
Dod02g3607 719 MobiDBLite consensus disorder prediction 622 638 - -
Dod02g3607 719 MobiDBLite consensus disorder prediction 310 332 - -
Dod02g3607 719 PANTHER ARFGAP/RECO-RELATED 411 719 IPR044820 GO:0005096
Dod02g3607 719 PANTHER ARFGAP/RECO-RELATED 1 390 IPR044820 GO:0005096
Dod02g3607 719 MobiDBLite consensus disorder prediction 313 332 - -
Dod02g3607 719 PANTHER ARF GTPASE ACTIVATOR 411 719 - -
Dod02g3607 719 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Dod02g3607 719 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Dod02g3607 719 MobiDBLite consensus disorder prediction 610 638 - -
Dod02g3607 719 MobiDBLite consensus disorder prediction 199 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3607 Dod-Chr2 73958486 73966036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3607 12 122 C2H2 Transcription Factor Family AT4G21160 31.452 2.83e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3607 - - gmx:102669541 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3607 02 73958486 73966036 Dod09g0975 09 30030786 30035957 ECH
Dod02g3607 02 73958486 73966036 Dod02g3607 02 73958486 73966036 ECH