Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3601 ATGGACGACATGGAAGACGACGCGAGGTACCCTCCAAAATCATCCTTCCCTTTGAACCGCCAGAACGCTTCCCACCGCCACAAACACCCAATCCGAGCCCAACCATTCAACCACAACCGCCCAACCACACGCTACCAGGAACAAGACGACGATGACGACGAGGACGAAGATCACGAGGAGTTCGAAGGTTACGAAAACGACGCCGTCGACGACGAAGAAGACGAAGAAGAAGAAGAAAACGAAGAGGGGCAAAACGGGTATTTCGAAGAATCCGGAGGAGGAGGGTTCAACCCCAAGAAGAAGCGAAAAGGTGCACGAGGCTCGCCTGTCCCGAACTACGAGTTCGCGCCACGTGTGAAGTTCCCGTACAACGAGGAGTGGTCGGAGCACGCGACCTTCGTGCTGCTCGAGGTGTGGGGGGACAAGTTCCTTCAACTCGGGAGGACAAGCTTGAGGTCCGACGATTGGCACGATGTTGCTGAAAAGGTTTCGGAGGAGTTGAAGGTGGAAAGAACCGTGGCACAGTGTAAGAGTGTGTTGGATAAGCTTAAGAGGAGGTATAAGAAGGAGAAGACAAAGGTTGAGGAGATGGGTTTGGGTTCTTGCAAGTGGGCTTTTTACAAGAAGATGGATATGTTGATGGCTTCTTCTCCAAGGCAAGAGTATGGGCTTGCTTGTGGTGTTGATGGTGGTGAGTATGTGTTCATGAACACTAGGGTGTATTTGAATAGGTCTAATGGGTTTGATGAGATGAGGGATAGTCCTGGGGAGAGTGAGAGTTCTGAGGAGGAGGATGATGATGATTTCGGTGGAGTTGGGGCTGCGTCCGCGGCGAGGAGGAGGGGTCGCAGTCGGGGCGGTCGTGTTGGTGGTGGTGGTGAGGAGAATGACGAGGAGGAGGAGGAGAGTTCGTTTAGAGTGCTGGCAGATTCGATTCAGAAGTTTGGGAAGATATATGAGAAGATTGAGAATAGTAAGAGGCAGCATATGATGGAGCTGGAGAAGATGAGGCTGGATTTTAATAGGGAGCTGGAGCTGCAGAAGAAGCAGATTCTGGAAAGGGCTCAGGCTGAGATTGCGAAGATACAGGAGGTGGATGAGGATGAAACGGATACTACTTCTACGGATAATCTCAGTGAATGA 1143 0.5144 MDDMEDDARYPPKSSFPLNRQNASHRHKHPIRAQPFNHNRPTTRYQEQDDDDDEDEDHEEFEGYENDAVDDEEDEEEEENEEGQNGYFEESGGGGFNPKKKRKGARGSPVPNYEFAPRVKFPYNEEWSEHATFVLLEVWGDKFLQLGRTSLRSDDWHDVAEKVSEELKVERTVAQCKSVLDKLKRRYKKEKTKVEEMGLGSCKWAFYKKMDMLMASSPRQEYGLACGVDGGEYVFMNTRVYLNRSNGFDEMRDSPGESESSEEEDDDDFGGVGAASAARRRGRSRGGRVGGGGEENDEEEEESSFRVLADSIQKFGKIYEKIENSKRQHMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEVDEDETDTTSTDNLSE* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3601 380 Coils Coil 61 81 - -
Dod02g3601 380 MobiDBLite consensus disorder prediction 48 85 - -
Dod02g3601 380 MobiDBLite consensus disorder prediction 1 115 - -
Dod02g3601 380 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 52 375 - -
Dod02g3601 380 Gene3D - 127 189 - -
Dod02g3601 380 MobiDBLite consensus disorder prediction 256 270 - -
Dod02g3601 380 Coils Coil 319 361 - -
Dod02g3601 380 MobiDBLite consensus disorder prediction 361 380 - -
Dod02g3601 380 Coils Coil 173 193 - -
Dod02g3601 380 MobiDBLite consensus disorder prediction 246 305 - -
Dod02g3601 380 Pfam Myb/SANT-like DNA-binding domain 125 212 IPR044822 -
Dod02g3601 380 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 52 375 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3601 Dod-Chr2 73818716 73821839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3601 305 377 Trihelix Transcription Factor Family AT3G14180 38.356 1.13e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod02g3601 Myb_DNA-bind_4 2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3601 - - gmx:100790166 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3601 02 73818716 73821839 Dod02g3601 02 73818716 73821839 ECH