Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3597 ATGTCTATCGATCTCTCCAATGGCCTCACCGCCGGTTCCTCCTTCAAGATCCCCACCGTCAAGTTCACCAAGCTCTTCATCAATGGACACTTTGTAGATTCCCTTTCAGGAAAGGAATTTGAGACCATAGATCCAAGGACAGGAGAAGTGATAGCGAGAATTGCGGAGGGAAGGAAAGAAGACATTGATGTTGCTGTGCAAGCAGCTCGTGTGGCTTTCGATAGTGGTCCATGGCCTCGCACGCCCGGTGCTGAGAGAGCAAAAATTATGATGAAATGGGCAGACCTAATTGATCAAAACAGAGAAGAAATAGCAGCACTGGATGCCATTGATGCTGGAAAGTTGTACCATCGGTGTAAGGATGCTGAAATTCCTGCAGCAGCAAACACTATACGCTACTATGCTGGTGCTGCTGACAAAATTCATGGAGAAGTATTAAAACCAGCTAGGGAGTTGCATGCATATACTTTGATGGAACCAATTGGTGTAGTGGGACACATCATTCCCTGGAATTTCCCAAGTTCCATGTTTATTACCAAGGTTAGTCCTGCCTTGGCTGCTGGTTGCACAATGGTTCTCAAGCCTGCGGAGCAAACGCCTCTCTCAGCCTTGTTCTATGCTCATCTAGCTAAACTGGCTGGAATTCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCACAACTGCAGGTGCTGCAATAAGCTCACACATGGACATTGATAAAGTCAGTTTCACTGGTTCCACAGAAGTAGGTCGTGAAGTGATGCAGGCTGCAGCTAGGAGCAACTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCCTCATTTTTGATGATGCTGATGTAGATAAAGCTGTTGACCTTGCTCTCTTGGGTGTCGTATATAACAAGGGAGAAATTTGTGTTGCAAGTTCCCGTGTATTTGTTCAGGAAGGAATTTATGATGAATTTGAGAAGAAATTGGTGGAAAAGGCAAAGGCTTGGATTGTTGGGGATCCTTTTGATCCTAAAGTTCAGCAAGGGCCTCAGGTTGACAAGACACAATTTGAGAAAATTATGTCCTATATTGAGCATGGAAAGAGAGAAGGAGCTACCCTTTTAACTGGTGGTAAAAGAGTGGGAAACAAGGGCTACTACATTGAGCCAACAATTTTCTCAACTGTTAAGGAGGACATGCTTATAACTAAGGATGAAATATTTGGTCCTGTGATGGCTCTAATGAAGTTCAAGACCATTGAAGAAGCAATTAAAAGTGCTAACAACACCAAGTATGGTCTGGCAGCAGGCATTGTGACCAAGAGCTTGGATACAGCAAACACAGTGTCAAGGTCTATTCGTGCAGGCATTATTTGGATCAACTGTTATTTTGCCTTCGGGAATGATATTCCTTATGGAGGATATAAGATGAGTGGATTTGGAAGAGATCTTGGATTGGAAGCTCTACACAAGTACCTGCAAGTTAAATCCGTTGTAACTCCCATTTACAATTCCCCCTGGCTTTGA 1512 0.4405 MSIDLSNGLTAGSSFKIPTVKFTKLFINGHFVDSLSGKEFETIDPRTGEVIARIAEGRKEDIDVAVQAARVAFDSGPWPRTPGAERAKIMMKWADLIDQNREEIAALDAIDAGKLYHRCKDAEIPAAANTIRYYAGAADKIHGEVLKPARELHAYTLMEPIGVVGHIIPWNFPSSMFITKVSPALAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGTTAGAAISSHMDIDKVSFTGSTEVGREVMQAAARSNLKPVSLELGGKSPLLIFDDADVDKAVDLALLGVVYNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWIVGDPFDPKVQQGPQVDKTQFEKIMSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSTVKEDMLITKDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKSLDTANTVSRSIRAGIIWINCYFAFGNDIPYGGYKMSGFGRDLGLEALHKYLQVKSVVTPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3597 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Dod02g3597 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
Dod02g3597 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Dod02g3597 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Dod02g3597 503 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 7 503 - -
Dod02g3597 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Dod02g3597 503 SUPERFAMILY ALDH-like 16 499 IPR016161 GO:0016491
Dod02g3597 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3597 Dod-Chr2 73779202 73792071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g3597 5 503 Aldehyde Dehydrogenase Gene Family AT3G24503 72.854 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3597 K12355 - gmx:100783920 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3017 04 53936746 53954805 Dod02g3597 02 73779202 73792071 PCT